RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 RPL5P46777 297 aaKnown RBP9.34□□□□□ -0.91
PTCH1-221ENST00000550914 FAM24BQ8N5W8 94 aa9.34□□□□□ -0.91
PTCH1-221ENST00000550914 YIPF6Q96EC8 236 aa9.34□□□□□ -0.91
PTCH1-221ENST00000550914 METTL26Q96S19 204 aa9.34□□□□□ -0.91
PTCH1-221ENST00000550914 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
PTCH1-221ENST00000550914 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
PTCH1-221ENST00000550914 IGHV4-28A0A0C4DH34 117 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 IGHV3-66A0A0C4DH42 116 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 IFNA17P01571 189 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 RNASE2P10153 161 aaKnown RBP9.33□□□□□ -0.92
PTCH1-221ENST00000550914 SPINK9Q5DT21 86 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 OR4X1Q8NH49 305 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 NARS2Q96I59 477 aaKnown RBP9.33□□□□□ -0.92
PTCH1-221ENST00000550914 PDCD10Q9BUL8 212 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 VCX3AQ9NNX9 186 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 COMMD3Q9UBI1 195 aa9.33□□□□□ -0.92
PTCH1-221ENST00000550914 TRAV10A0A0B4J240 114 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 B3GALNT1O75752 331 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
PTCH1-221ENST00000550914 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 P2RY1P47900 373 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 AKR1C2P52895 323 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 LSM3P62310 102 aaKnown RBP9.32□□□□□ -0.92
PTCH1-221ENST00000550914 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
PTCH1-221ENST00000550914 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 BSXQ3C1V8 233 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 LHFPL1Q86WI0 220 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 SNX29P2Q8IUI4 249 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 CENPSQ8N2Z9 138 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 DCANP1Q8TF63 244 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
PTCH1-221ENST00000550914 FNDC4Q9H6D8 234 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-221ENST00000550914 TRAV30A0A087WSZ9 112 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 C3orf85A0A1B0GTC6 90 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 M0QYG6 137 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 PGAM2P15259 253 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 TBPP20226 339 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 HLA-DMBP28068 263 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 OPRK1P41145 380 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 HOXA1P49639 335 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-221ENST00000550914 EIF2B2P49770 351 aaKnown RBP9.31□□□□□ -0.92
PTCH1-221ENST00000550914 PIGPP57054 158 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 TMEM230Q96A57 120 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 RNF126Q9BV68 326 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 ENY2Q9NPA8 101 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 U3KQE9 123 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 X6R8D5 127 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
PTCH1-221ENST00000550914 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 A0A087WXM4 84 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 RPS10-NUDT3A0A1W2PQS6 291 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 HELTA6NFD8 242 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 ZNF688P0C7X2 276 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 ELK1P19419 428 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 C4BPBP20851 252 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 ETV6P41212 452 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 PPP5CP53041 499 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 AP2S1P53680 142 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-221ENST00000550914 AARDQ4LEZ3 155 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 RNASE10Q5GAN6 216 aaKnown RBP9.3□□□□□ -0.92
PTCH1-221ENST00000550914 Q6ZTC4 211 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 FAM219AQ8IW50 185 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 CSNK1G2-AS1Q8NCQ2 148 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 ZFAND1Q8TCF1 268 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
PTCH1-221ENST00000550914 SEPSECSQ9HD40 501 aaKnown RBP9.3□□□□□ -0.92
PTCH1-221ENST00000550914 MRPL36Q9P0J6 103 aaKnown RBP9.3□□□□□ -0.92
PTCH1-221ENST00000550914 TBC1D24Q9ULP9 559 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 MUC4Q99102 2169 aa9.3□□□□□ -0.92
PTCH1-221ENST00000550914 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 RYR1P21817 5038 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 ELOA3CA0A087WX78 387 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-221ENST00000550914 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 PI3P19957 117 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 UCP1P25874 307 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 HTR2BP41595 481 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 SPCS3P61009 180 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 TRIM16LQ309B1 348 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 CCDC71LQ8N9Z2 235 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 OR52E5Q8NH55 327 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
PTCH1-221ENST00000550914 HPGDSO60760 199 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 AMBPP02760 352 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 CD3DP04234 171 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 SLC25A4P12235 298 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 YPEL3P61236 119 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-221ENST00000550914 NUTF2P61970 127 aaKnown RBP9.28□□□□□ -0.92
PTCH1-221ENST00000550914 MLANAQ16655 118 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 TIGITQ495A1 244 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 OR1S2Q8NGQ3 325 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 TERB2Q8NHR7 220 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 RNASEH2CQ8TDP1 164 aaKnown RBP9.28□□□□□ -0.92
PTCH1-221ENST00000550914 RAB40CQ96S21 281 aa9.28□□□□□ -0.92
PTCH1-221ENST00000550914 KLK11Q9UBX7 282 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms