RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 NOTCH1P46531 2555 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 F8W735 103 aaPredicted RBP12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 GNG7O60262 68 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 LY86O95711 162 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 IFNA4P05014 189 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 NPBWR1P48145 328 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 RPP30P78346 268 aaKnown RBP12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 FAM106AQ4KMX7 169 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 SPSB3Q6PJ21 355 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 OR9G4Q8NGQ1 327 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 C2orf50Q96LR7 162 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 OR4C12Q96R67 309 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 CHRDL1Q9BU40 450 aa12.41□□□□□ -0.42
CHMP1A-209ENST00000550872 IGHV3-35A0A0C4DH35 117 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 ZNF320A2RRD8 509 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 GOSR2O14653 212 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 NUPL2O15504 423 aaKnown RBP12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 SSNA1O43805 119 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 SAP30O75446 220 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 MBPP02686 304 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 CTSGP08311 255 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 RAB11AP62491 216 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 SPANXN5Q5MJ07 72 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 ETFRF1Q6IPR1 90 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 PEMTQ9UBM1 199 aa12.4□□□□□ -0.42
CHMP1A-209ENST00000550872 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 SSSCA1O60232 199 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 ADMP35318 185 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 INSL3P51460 131 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 BEAN1Q3B7T3 259 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 MRPL36Q9P0J6 103 aaKnown RBP12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
CHMP1A-209ENST00000550872 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 H3BP45 60 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 LGALS9O00182 355 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 SIX6O95475 246 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 TMEM50AO95807 157 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 SLC25A4P12235 298 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 REC114Q7Z4M0 266 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 OR4X1Q8NH49 305 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 SMIM8Q96KF7 97 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 RAB40CQ96S21 281 aa12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-209ENST00000550872 CLN5O75503 358 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 CSN3P07498 182 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 RND2P52198 227 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 RELQ04864 619 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 CD69Q07108 199 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 PRSS54Q6PEW0 395 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 SLC16A13Q7RTY0 426 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 ZNF436Q9C0F3 470 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 ALG5Q9Y673 324 aa12.37□□□□□ -0.43
CHMP1A-209ENST00000550872 K7EPK0 472 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 L7N2F9 121 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 NDUFA4O00483 81 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 SCGB2A1O75556 95 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 GPX4P36969 197 aaPredicted RBP12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 PAX9P55771 341 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 S100A10P60903 97 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 VAMP2P63027 116 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 DEFA6Q01524 100 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 IL15RAQ13261 267 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 UNQ9165/PRO28630Q6UXU0 137 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 NPIPB3Q92617 1050 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 ACY3Q96HD9 319 aa12.36□□□□□ -0.43
CHMP1A-209ENST00000550872 SORL1Q92673 2214 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 TRAV30A0A087WSZ9 112 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 C2orf70A6NJV1 201 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 YIF1AO95070 293 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 TAS2R30P59541 319 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 CYCSP99999 105 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 RAB32Q13637 225 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 TMEM116Q8NCL8 245 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 CACNG8Q8WXS5 425 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 C20orf24Q9BUV8 137 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 ZMAT5Q9UDW3 170 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 UFC1Q9Y3C8 167 aa12.35□□□□□ -0.43
CHMP1A-209ENST00000550872 A8MWP6 167 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 TSC22D2O75157 780 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 PRB2P02812 416 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 PVALBP20472 110 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 KRTAP10-11P60412 298 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 EGFEM1PQ0D2K5 195 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 OXA1LQ15070 435 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 TIGITQ495A1 244 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 HAPLN4Q86UW8 402 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 TMEM190Q8WZ59 177 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 SIGLEC8Q9NYZ4 499 aa12.34□□□□□ -0.43
CHMP1A-209ENST00000550872 IGHV3OR16-8A0A075B7F1 116 aa12.33□□□□□ -0.44
CHMP1A-209ENST00000550872 TMEM213A2RRL7 107 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms