RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 LYZL2Q7Z4W2 148 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 CENPSQ8N2Z9 138 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 SLC24A4Q8NFF2 622 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 ZMAT4Q9H898 229 aa12.96□□□□□ -0.33
CHMP1A-208ENST00000550102 ZNF207O43670 478 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 SCGB2A1O75556 95 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 YIF1AO95070 293 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 TNFRSF9Q07011 255 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 BAK1Q16611 211 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 ANKRD55Q3KP44 614 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 RCHY1Q96PM5 261 aa12.95□□□□□ -0.34
CHMP1A-208ENST00000550102 A0A1B0GU03 582 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 RPS10-NUDT3A0A1W2PQS6 291 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 ZNF414Q96IQ9 312 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 OR10C1Q96KK4 312 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 GINS3Q9BRX5 216 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 FNDC4Q9H6D8 234 aaPredicted RBP12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 NBEAL2Q6ZNJ1 2754 aa12.94□□□□□ -0.34
CHMP1A-208ENST00000550102 CENPXA8MT69 81 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 OR11H12B2RN74 326 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 NDUFB6O95139 128 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 IL7P13232 177 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 NPY1RP25929 384 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 UBE2MP61081 183 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 LAMTOR1Q6IAA8 161 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 ZNF600Q6ZNG1 722 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 NOXA1Q86UR1 476 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 LRTM2Q8N967 370 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 OR4X1Q8NH49 305 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 OR1S1Q8NH92 325 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 RNASEH2CQ8TDP1 164 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 SDHCQ99643 169 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 WFDC10AQ9H1F0 79 aa12.93□□□□□ -0.34
CHMP1A-208ENST00000550102 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 LINC00854A0A1B0GVQ3 168 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 TSPAN4O14817 238 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 SFT2D2O95562 160 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 DEFB125Q8N687 156 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 C7orf50Q9BRJ6 194 aaKnown RBP12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 SRD5A3Q9H8P0 318 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 SMPXQ9UHP9 88 aa12.92□□□□□ -0.34
CHMP1A-208ENST00000550102 CLN5O75503 358 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 SLC25A4P12235 298 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 BMI1P35226 326 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 HAGHQ16775 308 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 TOMM20LQ6UXN7 152 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 TMEM116Q8NCL8 245 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 RBKSQ9H477 322 aa12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 MRPL36Q9P0J6 103 aaKnown RBP12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 PUS1Q9Y606 427 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHMP1A-208ENST00000550102 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 TMEM50AO95807 157 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 IFNA10P01566 189 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 SLC25A6P12236 298 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 TMEM170AQ8WVE7 144 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 RHPN1-AS1Q9BWJ2 59 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 ZFAND3Q9H8U3 227 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 TMED3Q9Y3Q3 217 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 U3KQ87 197 aa12.9□□□□□ -0.34
CHMP1A-208ENST00000550102 TRAV30A0A087WSZ9 112 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 IGHV3-49A0A0A0MS15 119 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 CHEK1O14757 476 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 BTCP35070 178 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 RND2P52198 227 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 ETFRF1Q6IPR1 90 aa12.89□□□□□ -0.35
CHMP1A-208ENST00000550102 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 FAM90A26D6RGX4 464 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 PITX3O75364 302 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 ATP5IP56385 69 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 MLANAQ16655 118 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 PRSS54Q6PEW0 395 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 LINC00322Q6ZN03 302 aaPredicted RBP12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 RNF2Q99496 336 aa12.88□□□□□ -0.35
CHMP1A-208ENST00000550102 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 HOXB5P09067 269 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 IGLC1P0CG04 106 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 OR10J1P30954 320 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 TIGITQ495A1 244 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 OR1S2Q8NGQ3 325 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 FLVCR2Q9UPI3 526 aa12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
CHMP1A-208ENST00000550102 IGHV3OR16-13A0A075B7E8 117 aa12.86□□□□□ -0.35
CHMP1A-208ENST00000550102 IGHV3-74A0A0B4J1X5 117 aa12.86□□□□□ -0.35
CHMP1A-208ENST00000550102 MED6O75586 246 aa12.86□□□□□ -0.35
CHMP1A-208ENST00000550102 IFNA4P05014 189 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms