RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 BMI1P35226 326 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 APOC4P55056 127 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 CMC4P56277 68 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 TOMM20LQ6UXN7 152 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 ZNF600Q6ZNG1 722 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 Q6ZWC4 215 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 GALNT14Q96FL9 552 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 UBQLN2Q9UHD9 624 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 KCNIP3Q9Y2W7 256 aa13.85□□□□□ -0.19
CHMP1A-207ENST00000549328 KIR2DL5BA0A0G2JN68 375 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 KIR2DL5BA0A0G2JPC4 375 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 LCE6AA0A183 80 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 UBE2CO00762 179 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 HTR2BP41595 481 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 TMEM268Q5VZI3 342 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 KIR2DL5AQ8N109 375 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 OR4X1Q8NH49 305 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 KIR2DL5BQ8NHK3 375 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 IL22RA2Q969J5 263 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 FNDC4Q9H6D8 234 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 TP53TG1Q9Y2A0 90 aa13.84□□□□□ -0.19
CHMP1A-207ENST00000549328 CLN5O75503 358 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 OPRK1P41145 380 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 WFDC3Q8IUB2 231 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 GPR146Q96CH1 333 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 VSIRQ9H7M9 311 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 CACNG5Q9UF02 275 aa13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 PUS1Q9Y606 427 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHMP1A-207ENST00000549328 CSMD3Q7Z407 3707 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 IGHV3-49A0A0A0MS15 119 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 SCGB2A1O75556 95 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 PAFAH1B2P68402 229 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 TMEM230Q96A57 120 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 ZFAND3Q9H8U3 227 aa13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-207ENST00000549328 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 A0A1B0GU03 582 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 RPS10-NUDT3A0A1W2PQS6 291 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 TMEM187Q14656 261 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 MLANAQ16655 118 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 STPG3Q8N7X2 389 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 MCUBQ9NWR8 336 aa13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 MRPL36Q9P0J6 103 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-207ENST00000549328 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 SPRY2O43597 315 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 TCF24Q7RTU0 167 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 TMEM231Q9H6L2 316 aa13.8□□□□□ -0.2
CHMP1A-207ENST00000549328 A0A1W2PS18 150 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 CEBPZOSA8MTT3 80 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 SLC25A4P12235 298 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 NPPCP23582 126 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 FAUP35544 74 aaKnown RBP13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 NMSQ5H8A3 153 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 NOXA1Q86UR1 476 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 MAP6D1Q9H9H5 199 aa13.79□□□□□ -0.2
CHMP1A-207ENST00000549328 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 A0A0B4J2A0 478 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 IGKV1-17P01599 117 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 APOHP02749 345 aaPredicted RBP13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 ANXA3P12429 323 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 AKR1C4P17516 323 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 TFPI2P48307 235 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 AP3S2P59780 193 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 SRPXP78539 464 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 LILRB2Q8N423 598 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 SLC24A4Q8NFF2 622 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 DEDD2Q8WXF8 326 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 RNF183Q96D59 192 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 SHPKQ9UHJ6 478 aa13.78□□□□□ -0.2
CHMP1A-207ENST00000549328 DFFBO76075 338 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 RPL35AP18077 110 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 CRYBB3P26998 211 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 CCR6P51684 374 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 TNFRSF9Q07011 255 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 KLF9Q13886 244 aaPredicted RBP13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 DEFB135Q30KP9 77 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 ETFRF1Q6IPR1 90 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 PRSS54Q6PEW0 395 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 GBGT1Q8N5D6 347 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 TRIM63Q969Q1 353 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 METTL26Q96S19 204 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 MS4A6AQ9H2W1 248 aa13.77□□□□□ -0.21
CHMP1A-207ENST00000549328 DNASE2O00115 360 aaPredicted RBP13.76□□□□□ -0.21
CHMP1A-207ENST00000549328 S100A5P33763 92 aa13.76□□□□□ -0.21
CHMP1A-207ENST00000549328 SMCO1Q147U7 214 aa13.76□□□□□ -0.21
CHMP1A-207ENST00000549328 PYDC2Q56P42 97 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms