RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 BSCL2Q96G97 398 aaPredicted RBP7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 MS4A10Q96PG2 267 aa7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 C11orf1Q9H5F2 150 aa7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 RANGRFQ9HD47 186 aaPredicted RBP7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 C21orf62Q9NYP8 219 aa7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
SMARCD1-206ENST00000549274 FXYD6-FXYD2A0A087WZ82 144 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 HMSDA8MTL9 139 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 H3BP45 60 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 I3L2K1 104 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 NUPL2O15504 423 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 GNG7O60262 68 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 MPDU1O75352 247 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 MT-CO2P00403 227 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 CFDP00746 253 aaPredicted RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 LGALS1P09382 135 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 METTL15P1P0C7V9 234 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 ZP3P21754 424 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 AP2S1P53680 142 aaPredicted RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 PAX9P55771 341 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 SRSF2Q01130 221 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 RELQ04864 619 aaPredicted RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 OR2F1Q13607 317 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 ZNF266Q14584 549 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 SLC16A13Q7RTY0 426 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 S100A7AQ86SG5 101 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 TMEM252Q8N6L7 170 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 TMEM116Q8NCL8 245 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 OR4F17Q8NGA8 305 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 OR4X1Q8NH49 305 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 HYLS1Q96M11 299 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 AQP10Q96PS8 301 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 OR4F4Q96R69 305 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 CITED1Q99966 193 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 NPVFQ9HCQ7 196 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 KCNIP2Q9NS61 270 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 OR5AC2Q9NZP5 309 aa7.6□□□□□ -1.19
SMARCD1-206ENST00000549274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 A0A0D9SG52 128 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 K7EIM0 57 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 TAAR5O14804 337 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 PFDN1O60925 122 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 C1QBP02746 253 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 HSPB1P04792 205 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 AKR1C1Q04828 323 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 SLC38A11Q08AI6 406 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 ZNF345Q14585 488 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 Q56UQ5 140 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 ACOT7LQ6ZUV0 252 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 KLHL30-AS1Q8NEE0 82 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 SCARB1Q8WTV0 552 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 DPF1Q92782 380 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 OR4C12Q96R67 309 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 RNF126Q9BV68 326 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 TMEM147Q9BVK8 224 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 PEF1Q9UBV8 284 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 HSPB11Q9Y547 144 aa7.59□□□□□ -1.19
SMARCD1-206ENST00000549274 TRAV14DV4A0A0A6YYC5 116 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 FAM24AA6NFZ4 105 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 H0YIZ8 118 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 M0QZ24 198 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 GGCTO75223 188 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 CLN5O75503 358 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 NDUFB8O95169 186 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 TMEM50AO95807 157 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 IFNA5P01569 189 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 PRH1P02810 166 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 CD28P10747 220 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 MFAP2P55001 183 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 SELENOTP62341 195 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 EIF5AP63241 154 aaKnown RBP7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 EWSR1Q01844 656 aaKnown RBP eCLIP7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 ZFP69Q49AA0 526 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 TMEM144Q7Z5S9 345 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 PPP1R14BQ96C90 147 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 ST6GAL2Q96JF0 529 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 CITED2Q99967 270 aaPredicted RBP7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 TNFSF18Q9UNG2 199 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
SMARCD1-206ENST00000549274 BORCS7-ASMTA0A0B4J1R7 106 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 IGSF23A1L1A6 192 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 SMCO3A2RU48 225 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 LINC01619G3V211 115 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 I3L521 148 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 TGOLN2O43493 480 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 CST7O76096 145 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 BMI1P35226 326 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 ARL3P36405 182 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 MYCNOSP40205 109 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 RND2P52198 227 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 ZNF616Q08AN1 781 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 RPEL1Q2QD12 228 aa7.57□□□□□ -1.2
SMARCD1-206ENST00000549274 FAM106AQ4KMX7 169 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms