RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 TAS2R19P59542 299 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 DUSP18Q8NEJ0 188 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 OR4X1Q8NH49 305 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 OR52E5Q8NH55 327 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 TMEM222Q9H0R3 208 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 GPR132Q9UNW8 380 aa11.73□□□□□ -0.53
RAPGEF3-217ENST00000548434 CTDSPLO15194 276 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 CLN5O75503 358 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 B3GALNT1O75752 331 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 FAAP20Q6NZ36 180 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 SMIM4Q8WVI0 70 aa11.72□□□□□ -0.53
RAPGEF3-217ENST00000548434 TEX13DA0A0J9YY54 714 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 NUPR2A6NF83 97 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 IFNA17P01571 189 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 CD5P06127 495 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 OR5AC1P0C628 307 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 SNCAP37840 140 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 TFPI2P48307 235 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 SPCS3P61009 180 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 DYNC2LI1Q8TCX1 351 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 C15orf40Q8WUR7 153 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 GPR146Q96CH1 333 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 GINS3Q9BRX5 216 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 COPZ2Q9P299 210 aa11.71□□□□□ -0.53
RAPGEF3-217ENST00000548434 IGKV3-7A0A075B6H7 116 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 MPTX1A8MV57 137 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 K7EQG2 157 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 CORTO00230 105 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 NXPH3O95157 252 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 AKR1C2P52895 323 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 PMS2P11Q13670 270 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 OR4C16Q8NGL9 310 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 TMEM230Q96A57 120 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
RAPGEF3-217ENST00000548434 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 CXorf65A6NEN9 183 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 ATG12O94817 140 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 IGLC1P0CG04 106 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 SCGB2B2Q4G0G5 96 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 C2orf83Q53S99 150 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 DCANP1Q8TF63 244 aa11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 MRPS26Q9BYN8 205 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.69□□□□□ -0.54
RAPGEF3-217ENST00000548434 ANKRD20A5PA0PJZ0 165 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 GSTZ1O43708 216 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 SUB1P53999 127 aaKnown RBP eCLIP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 DEFB131AP59861 70 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 MEF2DQ14814 521 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 RBMS2Q15434 407 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 TRIM16LQ309B1 348 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 TIGITQ495A1 244 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 PHLDA1Q8WV24 401 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
RAPGEF3-217ENST00000548434 NPPCP23582 126 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 HTR2BP41595 481 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 TMEM187Q14656 261 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 LEMD1Q68G75 181 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 GRAMD2BQ96HH9 432 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 RARRES2Q99969 163 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 SLIRPQ9GZT3 109 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
RAPGEF3-217ENST00000548434 DNAH17Q9UFH2 4485 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 OPRK1P41145 380 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 DHODHQ02127 395 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 GPR141Q7Z602 305 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 Q8NAQ8 132 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 OR51S1Q8NGJ8 323 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 OR11H2Q8NH07 326 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 GLMPQ8WWB7 406 aa11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 C6orf62Q9GZU0 229 aaPredicted RBP11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 CCDC59Q9P031 241 aaKnown RBP11.66□□□□□ -0.54
RAPGEF3-217ENST00000548434 LY6G6CO95867 125 aa11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 AKAIN1P0CW23 69 aa11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 P2RY1P47900 373 aa11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 YPEL3P61236 119 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.54
RAPGEF3-217ENST00000548434 RNASEH2CQ8TDP1 164 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms