RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 TMEM268Q5VZI3 342 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 PLET1Q6UQ28 207 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 ZNF414Q96IQ9 312 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 TXN2Q99757 166 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 OVOL2Q9BRP0 275 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
PTCH1-217ENST00000548420 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 IZUMO1RA6ND01 250 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 OR2T8A6NH00 312 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 IFNA17P01571 189 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 CTSGP08311 255 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 AKR1C4P17516 323 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 EDN2P20800 178 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 CBLN1P23435 193 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 ADMP35318 185 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-217ENST00000548420 TMEM128Q5BJH2 165 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 SPINK9Q5DT21 86 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 NMSQ5H8A3 153 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 UNQ9165/PRO28630Q6UXU0 137 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 SCRT2Q9NQ03 307 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 ZC4H2Q9NQZ6 224 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 TECRQ9NZ01 308 aaKnown RBP10.4□□□□□ -0.74
PTCH1-217ENST00000548420 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
PTCH1-217ENST00000548420 IGHV3-21A0A0B4J1V1 117 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 ZNF785A8K8V0 405 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 RNASE2P10153 161 aaKnown RBP10.39□□□□□ -0.75
PTCH1-217ENST00000548420 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-217ENST00000548420 LCN12Q6JVE5 192 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 SLC35G3Q8N808 338 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 LRTM2Q8N967 370 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 PRR13Q9NZ81 148 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 CACNG5Q9UF02 275 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 CACFD1Q9UGQ2 172 aa10.39□□□□□ -0.75
PTCH1-217ENST00000548420 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 A6NHS1 94 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 NDUFA4O00483 81 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 MT-CO2P00403 227 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 ANXA3P12429 323 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 SNCAP37840 140 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 SUB1P53999 127 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTCH1-217ENST00000548420 MFAP4P55083 255 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 SRPXP78539 464 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 TM4SF20Q53R12 229 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 ZNF57Q68EA5 555 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-217ENST00000548420 LINC00299Q6ZSB3 139 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 LYZL2Q7Z4W2 148 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 LGI3Q8N145 548 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 RNASE11Q8TAA1 199 aaKnown RBP10.38□□□□□ -0.75
PTCH1-217ENST00000548420 PHLDA1Q8WV24 401 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-217ENST00000548420 TMEM190Q8WZ59 177 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 MARC2Q969Z3 335 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 MISP3Q96FF7 219 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
PTCH1-217ENST00000548420 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 IGHV3-35A0A0C4DH35 117 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 K7EMT4 169 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 SULT1A3P0DMM9 295 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 SULT1A4P0DMN0 295 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 CCR6P51684 374 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 RBMS2Q15434 407 aaKnown RBP10.37□□□□□ -0.75
PTCH1-217ENST00000548420 TRIQKQ629K1 86 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 UXS1Q8NBZ7 420 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 CACNG8Q8WXS5 425 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 WFDC10AQ9H1F0 79 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
PTCH1-217ENST00000548420 MLXQ9UH92 298 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
PTCH1-217ENST00000548420 A0A1B0GU03 582 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 DUXBA0A1W2PPF3 345 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 CORTO00230 105 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 IL7P13232 177 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 BTCP35070 178 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 HOXA1P49639 335 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-217ENST00000548420 UBE2MP61081 183 aaKnown RBP10.36□□□□□ -0.75
PTCH1-217ENST00000548420 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 Q56UQ5 140 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 TMED4Q7Z7H5 227 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 DEFB125Q8N687 156 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 C7orf50Q9BRJ6 194 aaKnown RBP10.36□□□□□ -0.75
PTCH1-217ENST00000548420 FNDC4Q9H6D8 234 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-217ENST00000548420 ENY2Q9NPA8 101 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 HSPB7Q9UBY9 170 aa10.36□□□□□ -0.75
PTCH1-217ENST00000548420 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 C15orf62A8K5M9 175 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 PLA2G10O15496 165 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 NUPL2O15504 423 aaKnown RBP10.35□□□□□ -0.75
PTCH1-217ENST00000548420 PITX3O75364 302 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 NDUFB6O95139 128 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 SFT2D2O95562 160 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 TMEM50AO95807 157 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 IGHV3-48P01763 117 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 SLC25A6P12236 298 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 HTR2BP41595 481 aa10.35□□□□□ -0.75
PTCH1-217ENST00000548420 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms