RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ERGIC3Q9Y282 383 aa0.6□□□□□ -2.31
DEPDC4-205ENST00000548313 DOCK5Q9H7D0 1870 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 EXOC1LA0A1B0GW35 172 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 CLDN25C9JDP6 229 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 INE1O15225 51 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 CDKL4Q5MAI5 379 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 SFT2D1Q8WV19 159 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 TSPAN32Q96QS1 320 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 C11orf68Q9H3H3 251 aaKnown RBP0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 NHP2Q9NX24 153 aaKnown RBP0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 RASL12Q9NYN1 266 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 GUCA1BQ9UMX6 200 aa0.59□□□□□ -2.31
DEPDC4-205ENST00000548313 PEAK1Q9H792 1746 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 CEP192Q8TEP8 1941 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 TRAV12-1A0A0B4J245 112 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 BUB1B-PAK6H3BSN5 160 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 FAAHO00519 579 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 PROSCO94903 275 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 IFNA5P01569 189 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 TNNC2P02585 160 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 RPL5P46777 297 aaKnown RBP0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 SULT1A1P50225 295 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 NKX2-5P52952 324 aaPredicted RBP0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 CDC42P60953 191 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 CCDC122Q5T0U0 273 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 SPOPLQ6IQ16 392 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 KRTAP19-3Q7Z4W3 81 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 ANKRD29Q8N6D5 301 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 C20orf27Q9GZN8 174 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 ACER3Q9NUN7 267 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 HS3ST2Q9Y278 367 aa0.58□□□□□ -2.32
DEPDC4-205ENST00000548313 MTUS2Q5JR59 1369 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 SBF1O95248 1867 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 TRBV6-8A0A0A6YYG3 113 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 PQLC2LA1A4F0 135 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 M0R036 132 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 SULT1B1O43704 296 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 LYZL6O75951 148 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 ACOT6Q3I5F7 207 aaPredicted RBP0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 TRAPPC6BQ86SZ2 158 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 OR10J5Q8NHC4 309 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 C4orf3Q8WVX3 66 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 AMELYQ99218 206 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 ECM29Q5VYK3 1845 aa0.57□□□□□ -2.32
DEPDC4-205ENST00000548313 WRNQ14191 1432 aaPredicted RBP eCLIP0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 DENND4CQ5VZ89 1909 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 NEO1Q92859 1461 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 MCM3APO60318 1980 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 EML5Q05BV3 1969 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 RNASE10Q5GAN6 216 aaKnown RBP0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 C1orf137Q5JT78 98 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 C8orf74Q6P047 294 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 GPR146Q96CH1 333 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 PPP1R2P1Q96PQ5 205 aa0.56□□□□□ -2.32
DEPDC4-205ENST00000548313 TGIF2-C20orf24A0A0A6YYL0 155 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 OR2J2O76002 312 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 CRYZL1O95825 349 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 MGST1P10620 155 aaKnown RBP0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 RPS20P60866 119 aaKnown RBP0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 YPEL3P61236 119 aaPredicted RBP0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 CNBPP62633 177 aaKnown RBP0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 SOSTDC1Q6X4U4 206 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 DCUN1D1Q96GG9 259 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 OSTCQ9NRP0 149 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 MRPL27Q9P0M9 148 aaKnown RBP0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 SLC35A3Q9Y2D2 325 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 CNTRLQ7Z7A1 2325 aa0.55□□□□□ -2.32
DEPDC4-205ENST00000548313 CHP2O43745 196 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 IFNA16P05015 189 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 RBP1P09455 135 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 SMIM10L2AP0DMW4 78 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 SMIM10L2BP0DMW5 78 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 S100A4P26447 101 aaKnown RBP0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 MPV17LQ2QL34 196 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 Q8N6K4 173 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 C3orf56Q8N813 242 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 ITFG2Q969R8 447 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 DCSTAMPQ9H295 470 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 EPDR1Q9UM22 224 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 PKIGQ9Y2B9 76 aa0.54□□□□□ -2.32
DEPDC4-205ENST00000548313 TRAV26-2A0A0B4J265 109 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 OR4C46A6NHA9 309 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 PIRO00625 290 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 SERPINA6P08185 405 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 SBSPONQ8IVN8 264 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 OR13D1Q8NGV5 346 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 TEX47Q8TBZ9 253 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 DDI1Q8WTU0 396 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 VPS29Q9UBQ0 182 aa0.53□□□□□ -2.32
DEPDC4-205ENST00000548313 HECW2Q9P2P5 1572 aa0.53□□□□□ -2.33
DEPDC4-205ENST00000548313 C7orf71A4D174 169 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 SMIM23A6NLE4 172 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 ZNF736B4DX44 427 aaPredicted RBP0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 AHSA1O95433 338 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 TTRP02766 147 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 IMPG1Q17R60 797 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 LINC01554Q52M75 96 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 KRT222Q8N1A0 295 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 BORCS5Q969J3 196 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms