RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 GNMTQ14749 295 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 ATP6AP1Q15904 470 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 ACTL10Q5JWF8 245 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 OR10K2Q6IF99 312 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM71F2Q6NXP2 309 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 DEGS2Q6QHC5 323 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 PLET1Q6UQ28 207 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 C19orf35Q6ZS72 473 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 FUNDC1Q8IVP5 155 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SAXO1Q8IYX7 474 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 CCDC71LQ8N9Z2 235 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 DRAXINQ8NBI3 349 aaPredicted RBP1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SUMF2Q8NBJ7 301 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 OR10A6Q8NH74 314 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 IL22RA2Q969J5 263 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 FGGYQ96C11 551 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 FMO2Q99518 471 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 RHPN1-AS1Q9BWJ2 59 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC25A39Q9BZJ4 359 aaPredicted RBP1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 MS4A6AQ9H2W1 248 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 IFI27L2Q9H2X8 130 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 OR2S2Q9NQN1 319 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC35D1Q9NTN3 355 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 OR1A1Q9P1Q5 309 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 XCL2Q9UBD3 114 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SMPXQ9UHP9 88 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 KLK12Q9UKR0 248 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 SAR1BQ9Y6B6 198 aa1.34□□□□□ -2.19
DEPDC4-204ENST00000547823 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 IGHV3-49A0A0A0MS15 119 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TRAV2A0A0B4J234 112 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 IGHV7-4-1A0A0J9YVY3 117 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SPRR5A0A1B0GTR4 108 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 RNF222A6NCQ9 220 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TRPC5OSA6NMA1 111 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 H3BTX0 84 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 DNASE2O00115 360 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 AIPO00170 330 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 NDUFA4O00483 81 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 RAB29O14966 203 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SOCS1O15524 211 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 YPEL1O60688 119 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 CA11O75493 328 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SERPINA3P01011 423 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 IGHV3-48P01763 117 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ATP5G1P05496 136 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 KRTAP2-3P0C7H8 128 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 DEFB130BP0DP73 79 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 DEFB130AP0DP74 79 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 HIST1H1BP16401 226 aaKnown RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 RCC1P18754 421 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ATF1P18846 271 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 PRDX6P30041 224 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 KDELR2P33947 212 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ATP5G3P48201 142 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 GSSP48637 474 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 MRPL19P49406 292 aaKnown RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 OR2B8PP59922 312 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 NUTF2P61970 127 aaKnown RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 DGCR6Q14129 220 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TNXAQ16473 311 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 PRSS8Q16651 343 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 KLK9Q2XQG4 91 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF829Q3KNS6 432 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 PIGYQ3MUY2 71 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 LINC01620Q4KN68 170 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 LRRC23Q53EV4 343 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 LY6G6FQ5SQ64 297 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 C6orf183Q5T699 404 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SYT6Q5T7P8 510 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 BCL2L15Q5TBC7 163 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 UBE2UQ5VVX9 321 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 NXNL2Q5VZ03 156 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ELP2Q6IA86 826 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ETFRF1Q6IPR1 90 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 UTS2BQ765I0 119 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TRMT10CQ7L0Y3 403 aaKnown RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 VTCN1Q7Z7D3 282 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 PDPNQ86YL7 162 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ELMOD2Q8IZ81 293 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 CBR4Q8N4T8 237 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 OR5D18Q8NGL1 313 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 OR4K15Q8NH41 348 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ZNF502Q8TBZ5 544 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 RXFP4Q8TDU9 374 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 C7orf33Q8WU49 177 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 PP6455Q8WZ26 134 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 FCGR1BQ92637 280 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 RBPMSQ93062 196 aaKnown RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 GNPNAT1Q96EK6 184 aaPredicted RBP1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TMEM101Q96IK0 257 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SLC35E1Q96K37 410 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 OPALINQ96PE5 141 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 YPEL2Q96QA6 119 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 OR52B2Q96RD2 323 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 ATP6V0BQ99437 205 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 CGREF1Q99674 301 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 TXN2Q99757 166 aa1.33□□□□□ -2.2
DEPDC4-204ENST00000547823 SPIN2AQ99865 258 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms