RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 PAX2Q02962 417 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 PNRC1Q12796 327 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 OR4P4Q8NGL7 312 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 OR4F5Q8NH21 305 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 OR4F4Q96R69 305 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 ZNF430Q9H8G1 570 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 TMEM250H0YL14 139 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 SLC25A17O43808 307 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 NDUFS6O75380 124 aaKnown RBP13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 PRTN3P24158 256 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 STPG3Q8N7X2 389 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 SDF2L1Q9HCN8 221 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 INSIG2Q9Y5U4 225 aa13.25□□□□□ -0.29
CHMP1A-204ENST00000547687 ZNF98A6NK75 572 aa13.24□□□□□ -0.29
CHMP1A-204ENST00000547687 KLRD1Q13241 179 aa13.24□□□□□ -0.29
CHMP1A-204ENST00000547687 IGHV2-70DA0A0C4DH43 119 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 CGB1A6NKQ9 187 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 RAB5AP20339 215 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 GAMTQ14353 236 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 MLANAQ16655 118 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 HCP5Q6MZN7 132 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 C1orf122Q6ZSJ8 110 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 MOB3BQ86TA1 216 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 ABHD5Q8WTS1 349 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 TNCP24821 2201 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 IGHV1-3A0A0C4DH29 117 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 STAG3L2P0CL84 134 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 STAG3L3P0CL85 134 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 MAS1LP35410 378 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 PRR20EP86478 221 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 PRR20CP86479 221 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 PRR20DP86480 221 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 PRR20BP86481 221 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 PRR20AP86496 221 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 CD69Q07108 199 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 ZNF674Q2M3X9 581 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 C10orf55Q5SWW7 151 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 VMO1Q7Z5L0 202 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 TEX45Q8NA69 505 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 OR11H6Q8NGC7 330 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 YPEL4Q96NS1 127 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 AMMECR1Q9Y4X0 333 aaPredicted RBP13.23□□□□□ -0.29
CHMP1A-204ENST00000547687 C1orf196B1AJZ1 125 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 CXorf1O96002 111 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 LINC00869P0C866 280 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 RHOBP62745 196 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 WT1-ASQ06250 92 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 TMEM241Q24JQ0 296 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 LDLRAD2Q5SZI1 272 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 ARL6IP6Q8N6S5 226 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 TPSG1Q9NRR2 321 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 NAT8Q9UHE5 227 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 FOXH1O75593 365 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 GPX4P36969 197 aaPredicted RBP13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.293e-8■■□□□ 12.4
CHMP1A-204ENST00000547687 RAB5BP61020 215 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 MRGPRG-AS1Q2M3A8 158 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 KRTAP21-3Q3LHN1 58 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 FAM120AOSQ5T036 256 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 CACNG8Q8WXS5 425 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 RPEQ96AT9 228 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 SIRPDQ9H106 197 aa13.22□□□□□ -0.29
CHMP1A-204ENST00000547687 LY6LH3BQJ8 138 aa13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 UBE2G2P60604 165 aa13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 HABP2Q14520 560 aaPredicted RBP13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 LINC01356Q8N9X3 169 aa13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 PARLQ9H300 379 aa13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 SEPSECSQ9HD40 501 aaKnown RBP13.21□□□□□ -0.29
CHMP1A-204ENST00000547687 IGKV1OR2-108A0A075B7D4 117 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 A0A1W2PRD5 423 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 A0A1W2PRF3 423 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 A0A1W2PRM7 423 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 OR10J1P30954 320 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 SSTP61278 116 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 CYP2G1PQ6ZSU1 146 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 NANPQ8TBE9 248 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 C2CD4CQ8TF44 421 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 ODF3BA8MYP8 253 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 CRYGBP07316 175 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 CNTFRP26992 372 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 HTR1DP28221 377 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 SRSF2Q01130 221 aaKnown RBP13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 PSG5Q15238 335 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 PRSS8Q16651 343 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 SLC16A13Q7RTY0 426 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 MMD2Q8IY49 270 aa13.2□□□□□ -0.3
CHMP1A-204ENST00000547687 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms