RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LINC00869P0C866 280 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 CD24P25063 80 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 COL8A1P27658 744 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 NPBWR1P48145 328 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 ZNF726P1Q15940 193 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 HAGHQ16775 308 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 Q5PR19 223 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 Q8N9W7 124 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 STXBP6Q8NFX7 210 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 OR4X1Q8NH49 305 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 OR2T6Q8NHC8 308 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 SCRT1Q9BWW7 348 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 TMEM231Q9H6L2 316 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 SLC25A22Q9H936 323 aa10.68□□□□□ -0.7
PTCH1-215ENST00000547672 GAR1Q9NY12 217 aaKnown RBP10.68□□□□□ -0.7
PTCH1-215ENST00000547672 YIF1AO95070 293 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 STAG3L2P0CL84 134 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 STAG3L3P0CL85 134 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 RND2P52198 227 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 SRSF3P84103 164 aaKnown RBP10.67□□□□□ -0.7
PTCH1-215ENST00000547672 FAM74A3Q4VXF1 159 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 PQLC2Q6ZP29 291 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 SGMS2Q8NHU3 365 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 C17orf50Q8WW18 174 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 TXN2Q99757 166 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 SLC25A33Q9BSK2 321 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 TMEM167BQ9NRX6 74 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 TNFRSF19Q9NS68 423 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 FUT9Q9Y231 359 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 WNK2Q9Y3S1 2297 aa10.67□□□□□ -0.7
PTCH1-215ENST00000547672 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 A0A096LNT2 108 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 PDE6DO43924 150 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 MFAP4P55083 255 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 ICAM4Q14773 271 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 AKIRIN2Q53H80 203 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 IQCF2Q8IXL9 164 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 TMEM190Q8WZ59 177 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-215ENST00000547672 SSX3Q99909 188 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 RARRES2Q99969 163 aa10.66□□□□□ -0.7
PTCH1-215ENST00000547672 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-215ENST00000547672 IGHV7-81A0A0B4J1V7 117 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 RNF223E7ERA6 249 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 I3L2K1 104 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 SRP19P09132 144 aaKnown RBP10.65□□□□□ -0.7
PTCH1-215ENST00000547672 OR5G3P0C626 314 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 FGF8P55075 233 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-215ENST00000547672 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-215ENST00000547672 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-215ENST00000547672 MLANAQ16655 118 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 FAM78BQ5VT40 261 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 VN1R17PQ8TDU5 208 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 RXFP4Q8TDU9 374 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 NKX6-2Q9C056 277 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-215ENST00000547672 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
PTCH1-215ENST00000547672 A0A0U1RQK1 487 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 F6UZH7 168 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 HYPMO75409 117 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 C8orf88P0DMB2 117 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 KRTAP10-9P60411 292 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 KLK9Q2XQG4 91 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 OR5R1Q8NH85 324 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-215ENST00000547672 ATP6V0BQ99437 205 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 NIPSNAP3BQ9BS92 247 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 TMUB1Q9BVT8 246 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
PTCH1-215ENST00000547672 LRRK2Q5S007 2527 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 IGKV1OR2-108A0A075B7D4 117 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 B4DEV8 164 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 MFAP2P55001 183 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 PLP1P60201 277 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 PNRC1Q12796 327 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-215ENST00000547672 RHEBQ15382 184 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 UNQ5815/PRO19632Q6UWF5 114 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 SPNS3Q6ZMD2 512 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 Q96MF0 132 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 UHRF2Q96PU4 802 aa10.63□□□□□ -0.71
PTCH1-215ENST00000547672 FLNBO75369 2602 aaKnown RBP10.63□□□□□ -0.71
PTCH1-215ENST00000547672 IGLV11-55A0A075B6I3 123 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 A6NDX4 124 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 C9JQL5 133 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 GNG7O60262 68 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 RD3LP0DJH9 198 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 APELAP0DMC3 54 aa10.62□□□□□ -0.71
PTCH1-215ENST00000547672 GCHFRP30047 84 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms