RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 A0A1B0GU03 582 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 RPS10-NUDT3A0A1W2PQS6 291 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 FAM25AB3EWG3 89 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 FAM25CB3EWG5 89 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 FAM25GB3EWG6 89 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 M0QYG6 137 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 ETV6P41212 452 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 RPL5P46777 297 aaKnown RBP16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 AP2S1P53680 142 aaPredicted RBP16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 IZUMO4Q1ZYL8 232 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 ARRDC1Q8N5I2 433 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 OR4X1Q8NH49 305 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 KMT2AQ03164 3969 aa16.82■□□□□ 0.28
SMARCD1-204ENST00000547637 A0A0B4J293 547 aa16.81■□□□□ 0.28
SMARCD1-204ENST00000547637 B3GALNT1O75752 331 aa16.81■□□□□ 0.28
SMARCD1-204ENST00000547637 CRYBB3P26998 211 aa16.81■□□□□ 0.28
SMARCD1-204ENST00000547637 P2RY1P47900 373 aa16.81■□□□□ 0.28
SMARCD1-204ENST00000547637 HELTA6NFD8 242 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 K7EQG2 157 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 IGKV1-5P01602 117 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 RNASE2P10153 161 aaKnown RBP16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 TBPP20226 339 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 RORCP51449 518 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 PVRIGQ6DKI7 326 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 Q8NAQ8 132 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 C15orf40Q8WUR7 153 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 TP53RKQ96S44 253 aa16.8■□□□□ 0.28
SMARCD1-204ENST00000547637 TRAV10A0A0B4J240 114 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 TNFAIP8O95379 198 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 ELK1P19419 428 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 PI3P19957 117 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 NUTF2P61970 127 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 TRPT1Q86TN4 253 aaKnown RBP16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 FAM24BQ8N5W8 94 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 AP3S1Q92572 193 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 APLNQ9ULZ1 77 aa16.79■□□□□ 0.28
SMARCD1-204ENST00000547637 IGHV4-28A0A0C4DH34 117 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 HPGDSO60760 199 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 ZNF688P0C7X2 276 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 HTR2BP41595 481 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 FAM219AQ8IW50 185 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 Q8WTZ3 238 aa16.78■□□□□ 0.28
SMARCD1-204ENST00000547637 HLA-DMBP28068 263 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PPP5CP53041 499 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 SPCS3P61009 180 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PRR20EP86478 221 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PRR20CP86479 221 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PRR20DP86480 221 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PRR20BP86481 221 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 PRR20AP86496 221 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 DHRS2Q13268 280 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 ACTL10Q5JWF8 245 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 LHFPL1Q86WI0 220 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 TERB2Q8NHR7 220 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 KLK11Q9UBX7 282 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 TBC1D24Q9ULP9 559 aa16.77■□□□□ 0.28
SMARCD1-204ENST00000547637 AGRNO00468 2067 aa16.77■□□□□ 0.27
SMARCD1-204ENST00000547637 FRAS1Q86XX4 4008 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 CD3DP04234 171 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 P0C879 139 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 VBP1P61758 197 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 NCS1P62166 190 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 SNRPD3P62318 126 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 OR1S2Q8NGQ3 325 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 FUNDC2Q9BWH2 189 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 C1QTNF4Q9BXJ3 329 aa16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 FNDC4Q9H6D8 234 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 HEYLQ9NQ87 328 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.76■□□□□ 0.27
SMARCD1-204ENST00000547637 KNCNA6PVL3 124 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 ZNF705EA8MWA4 302 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 RBMY1A1P0DJD3 496 aaKnown RBP16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 RBMY1CP0DJD4 496 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 SLC25A4P12235 298 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 UCP1P25874 307 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 RBMY1FQ15415 496 aaKnown RBP16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 SP6Q3SY56 376 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 TIGITQ495A1 244 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 SCGB2B2Q4G0G5 96 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 RNASE12Q5GAN4 147 aaKnown RBP16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 ETFRF1Q6IPR1 90 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 OR52E5Q8NH55 327 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 CACFD1Q9UGQ2 172 aa16.75■□□□□ 0.27
SMARCD1-204ENST00000547637 HNRNPCP07910 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 TAS2R19P59542 299 aa16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 MLANAQ16655 118 aa16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 NOXA1Q86UR1 476 aa16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 DCANP1Q8TF63 244 aa16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 MTFP1Q9UDX5 166 aa16.74■□□□□ 0.27
SMARCD1-204ENST00000547637 IGHV4-4A0A075B6R2 117 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 GIG44P09565 113 aaPredicted RBP16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 NPY1RP25929 384 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 YPEL3P61236 119 aaPredicted RBP16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 LINC00336Q6ZUF6 198 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 RNASEH2CQ8TDP1 164 aaKnown RBP16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 RAB40CQ96S21 281 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 RNF126Q9BV68 326 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 EXTL2Q9UBQ6 330 aa16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 C14orf166Q9Y224 244 aaKnown RBP16.73■□□□□ 0.27
SMARCD1-204ENST00000547637 TEX13DA0A0J9YY54 714 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms