RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 PYYP10082 97 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
CUX1-212ENST00000547394 CYP2G1PQ6ZSU1 146 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 DYNAPQ8N1N2 210 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 KIR3DL3Q8N743 410 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 ZNF503Q96F45 646 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 TIMD4Q96H15 378 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 SLC25A33Q9BSK2 321 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 SSBP3Q9BWW4 388 aaPredicted RBP8.88□□□□□ -0.99
CUX1-212ENST00000547394 LOC105371242A0A075B767 164 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 IGLC7A0M8Q6 106 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 IGHV2-5P01817 119 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 IL3RAP26951 378 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 RPL29P47914 159 aaKnown RBP8.88□□□□□ -0.99
CUX1-212ENST00000547394 RHOBP62745 196 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 MMDQ15546 238 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 PRSS8Q16651 343 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 LEMD1Q68G75 181 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 ZNF596Q8TC21 504 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 SIGLEC9Q9Y336 463 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 FBN2P35556 2912 aa8.88□□□□□ -0.99
CUX1-212ENST00000547394 A0A1W2PPQ1 181 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 CXorf1O96002 111 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 RNF224P0DH78 156 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 GFI1BQ5VTD9 330 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 SLC35E1Q96K37 410 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 FAM210BQ96KR6 192 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 CLDN34H7C241 214 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 AP4M1O00189 453 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 OR5G3P0C626 314 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 ORM2P19652 201 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 RPL27AP46776 148 aaKnown RBP8.87□□□□□ -0.99
CUX1-212ENST00000547394 ZNF137PP52743 207 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 NDUFA6P56556 154 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 VSTM2AQ8TAG5 236 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 SGK494Q96LW2 274 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 DMRT1Q9Y5R6 373 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 IGHV3OR16-10A0A075B7F0 116 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 A0A087WWC5 75 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 CNIH1O95406 144 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 MC5RP33032 325 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 GPR6P46095 362 aaPredicted RBP8.87□□□□□ -0.99
CUX1-212ENST00000547394 PPP1R27Q86WC6 154 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 NHLRC2Q8NBF2 726 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 OR51M1Q9H341 326 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 ABCA2Q9BZC7 2435 aa8.87□□□□□ -0.99
CUX1-212ENST00000547394 IGKV1D-37A0A075B6S9 117 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 H7BYZ3 331 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 OR5I1Q13606 314 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 LINC00469Q8N7U9 141 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 LINC00479Q96M42 142 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 TCEAL7Q9BRU2 100 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 CRYBB3P26998 211 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 OR4X1Q8NH49 305 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 BPESC1Q9GZL8 116 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 CHODLQ9H9P2 273 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 FUT9Q9Y231 359 aa8.86□□□□□ -0.99
CUX1-212ENST00000547394 SH2D7A6NKC9 451 aaPredicted RBP8.85□□□□□ -0.99
CUX1-212ENST00000547394 LY86O95711 162 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 HTR1DP28221 377 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 GALR1P47211 349 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 PNRC1Q12796 327 aaPredicted RBP8.85□□□□□ -0.99
CUX1-212ENST00000547394 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 VMO1Q7Z5L0 202 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 C1QL4Q86Z23 238 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 NRGNQ92686 78 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 FRZBQ92765 325 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 TLN2Q9Y4G6 2542 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 A0A1W2PN81 502 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 SLC17A3O00476 420 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 VENTXO95231 258 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 S100PP25815 95 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 LGALS7P47929 136 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
CUX1-212ENST00000547394 TPTE2P1Q5T6R2 138 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 C8orf31Q8N9H6 132 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 OR5AU1Q8NGC0 362 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 OR1B1Q8NGR6 318 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 OCC1Q8TAD7 63 aa8.85□□□□□ -0.99
CUX1-212ENST00000547394 SRSF12Q8WXF0 261 aaKnown RBP8.85□□□□□ -0.99
CUX1-212ENST00000547394 NCBP2LA6PVI3 153 aaKnown RBP8.84□□□□□ -0.99
CUX1-212ENST00000547394 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 TOX4O94842 621 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 COMPP49747 757 aaPredicted RBP8.84□□□□□ -0.99
CUX1-212ENST00000547394 LURAP1LQ8IV03 231 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 ZNF355PQ9NSJ1 428 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 MT-CO2P00403 227 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 IGHV3-23P01764 117 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
CUX1-212ENST00000547394 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms