RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 CD7P09564 240 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 OPRK1P41145 380 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 UBE2MP61081 183 aaKnown RBP11.94□□□□□ -0.5
DDX54-204ENST00000546898 BAK1Q16611 211 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 C2orf83Q53S99 150 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 LAMTOR1Q6IAA8 161 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 CENPSQ8N2Z9 138 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 LRTM2Q8N967 370 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 SLC24A4Q8NFF2 622 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 ZNF414Q96IQ9 312 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 C7orf50Q9BRJ6 194 aaKnown RBP11.94□□□□□ -0.5
DDX54-204ENST00000546898 HIPK2Q9H2X6 1198 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 HSPB7Q9UBY9 170 aa11.94□□□□□ -0.5
DDX54-204ENST00000546898 A0A1B0GU03 582 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 RPS10-NUDT3A0A1W2PQS6 291 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 SCAF4O95104 1147 aaKnown RBP11.93□□□□□ -0.5
DDX54-204ENST00000546898 VAMP1P23763 118 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 ZNF600Q6ZNG1 722 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 NOXA1Q86UR1 476 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 OR52B4Q8NGK2 314 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 OR4X1Q8NH49 305 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
DDX54-204ENST00000546898 RCHY1Q96PM5 261 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 SDHCQ99643 169 aaPredicted RBP11.93□□□□□ -0.5
DDX54-204ENST00000546898 SPAG8Q99932 426 aaPredicted RBP11.93□□□□□ -0.5
DDX54-204ENST00000546898 GINS3Q9BRX5 216 aa11.93□□□□□ -0.5
DDX54-204ENST00000546898 FNDC4Q9H6D8 234 aaPredicted RBP11.93□□□□□ -0.5
DDX54-204ENST00000546898 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 CENPXA8MT69 81 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 OR11H12B2RN74 326 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 TSPAN4O14817 238 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 CLN5O75503 358 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 YIF1AO95070 293 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 SFT2D2O95562 160 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 TMEM50AO95807 157 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 NPY1RP25929 384 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 SMPXQ9UHP9 88 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 SELENOKQ9Y6D0 94 aa11.92□□□□□ -0.5
DDX54-204ENST00000546898 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
DDX54-204ENST00000546898 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 TRAV30A0A087WSZ9 112 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 ZNF207O43670 478 aaKnown RBP11.91□□□□□ -0.5
DDX54-204ENST00000546898 NDUFB6O95139 128 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 SLC25A4P12235 298 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 SLC25A6P12236 298 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 IL7P13232 177 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 BMI1P35226 326 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 PPP1R1AQ13522 171 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 HAGHQ16775 308 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
DDX54-204ENST00000546898 DEFB125Q8N687 156 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 DTD1Q8TEA8 209 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 SPATA25Q9BR10 227 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 SRD5A3Q9H8P0 318 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 TMED3Q9Y3Q3 217 aa11.91□□□□□ -0.5
DDX54-204ENST00000546898 TRAV14DV4A0A0A6YYC5 116 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 NXPH3O95157 252 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 ATP5IP56385 69 aaPredicted RBP11.9□□□□□ -0.5
DDX54-204ENST00000546898 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 TOMM20LQ6UXN7 152 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 WFDC10AQ9H1F0 79 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 RBKSQ9H477 322 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 ZFAND3Q9H8U3 227 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
DDX54-204ENST00000546898 PUS1Q9Y606 427 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX54-204ENST00000546898 U3KQ87 197 aa11.9□□□□□ -0.5
DDX54-204ENST00000546898 OR4C46A6NHA9 309 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 CHEK1O14757 476 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 PITX3O75364 302 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 IFNA10P01566 189 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 CD5P06127 495 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 CNPY1Q3B7I2 92 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
DDX54-204ENST00000546898 BTCP35070 178 aa11.88□□□□□ -0.51
DDX54-204ENST00000546898 MLANAQ16655 118 aa11.88□□□□□ -0.51
DDX54-204ENST00000546898 PRSS54Q6PEW0 395 aa11.88□□□□□ -0.51
DDX54-204ENST00000546898 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
DDX54-204ENST00000546898 RNF2Q99496 336 aa11.88□□□□□ -0.51
DDX54-204ENST00000546898 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 C9orf170A2RU37 121 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 RND2P52198 227 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 VSIRQ9H7M9 311 aa11.87□□□□□ -0.51
DDX54-204ENST00000546898 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
DDX54-204ENST00000546898 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
DDX54-204ENST00000546898 MED6O75586 246 aa11.86□□□□□ -0.51
DDX54-204ENST00000546898 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
DDX54-204ENST00000546898 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
DDX54-204ENST00000546898 IGLC1P0CG04 106 aa11.86□□□□□ -0.51
DDX54-204ENST00000546898 TIGITQ495A1 244 aa11.86□□□□□ -0.51
DDX54-204ENST00000546898 COQ8AQ8NI60 647 aa11.86□□□□□ -0.51
DDX54-204ENST00000546898 CCDC32Q9BV29 185 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms