RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 MAGT1Q9H0U3 335 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
CCDC38-203ENST00000546803 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
CCDC38-203ENST00000546803 WRBO00258 174 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 GNG7O60262 68 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 IGHV3-48P01763 117 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 CSN3P07498 182 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 CTSGP08311 255 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 IAPPP10997 89 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 SLC25A4P12235 298 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 RAB11AP62491 216 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 RELQ04864 619 aaPredicted RBP12.82□□□□□ -0.36
CCDC38-203ENST00000546803 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 IL34Q6ZMJ4 242 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 OR4X1Q8NH49 305 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 CHRDL1Q9BU40 450 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 GSKIPQ9P0R6 139 aa12.82□□□□□ -0.36
CCDC38-203ENST00000546803 ZNF320A2RRD8 509 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 C5orf51A6NDU8 294 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 NDUFA4O00483 81 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 CCSO14618 274 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 IFNA4P05014 189 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 ADMP35318 185 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
CCDC38-203ENST00000546803 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 FBN3Q75N90 2809 aa12.81□□□□□ -0.36
CCDC38-203ENST00000546803 TRAV30A0A087WSZ9 112 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 A8MWP6 167 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 CLN5O75503 358 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 TMEM50AO95807 157 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
CCDC38-203ENST00000546803 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 MLANAQ16655 118 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 GSG1LQ6UXU4 331 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 RAB40CQ96S21 281 aa12.8□□□□□ -0.36
CCDC38-203ENST00000546803 NOTCH3Q9UM47 2321 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 IGHV3-35A0A0C4DH35 117 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 C2orf70A6NJV1 201 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 SPNP16150 400 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 GPX4P36969 197 aaPredicted RBP12.79□□□□□ -0.36
CCDC38-203ENST00000546803 CD69Q07108 199 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 DCTN2Q13561 401 aaKnown RBP12.79□□□□□ -0.36
CCDC38-203ENST00000546803 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 UNQ9165/PRO28630Q6UXU0 137 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 CACNG8Q8WXS5 425 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 TMEM190Q8WZ59 177 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 SMIM8Q96KF7 97 aa12.79□□□□□ -0.36
CCDC38-203ENST00000546803 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
CCDC38-203ENST00000546803 PKD1L1Q8TDX9 2849 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 K7EMT4 169 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 SSSCA1O60232 199 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 MBPP02686 304 aaPredicted RBP12.78□□□□□ -0.36
CCDC38-203ENST00000546803 FOLR2P14207 255 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 TAS2R30P59541 319 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 SPANXN5Q5MJ07 72 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 SLC16A13Q7RTY0 426 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 PSENENQ9NZ42 101 aa12.78□□□□□ -0.36
CCDC38-203ENST00000546803 MRPL36Q9P0J6 103 aaKnown RBP12.78□□□□□ -0.36
CCDC38-203ENST00000546803 PAIP2BQ9ULR5 123 aaKnown RBP12.78□□□□□ -0.36
CCDC38-203ENST00000546803 CBLN1P23435 193 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 RND2P52198 227 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 ADAMTSL5Q6ZMM2 481 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 ZNF600Q6ZNG1 722 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 OR1S2Q8NGQ3 325 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 OR2K2Q8NGT1 345 aa12.77□□□□□ -0.37
CCDC38-203ENST00000546803 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.37
CCDC38-203ENST00000546803 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
CCDC38-203ENST00000546803 TECRQ9NZ01 308 aaKnown RBP12.77□□□□□ -0.37
CCDC38-203ENST00000546803 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.37
CCDC38-203ENST00000546803 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
CCDC38-203ENST00000546803 C7orf66A4D0T2 115 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 YIF1AO95070 293 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 C8orf88P0DMB2 117 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 DYNLRB2Q8TF09 96 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 SLC35E1Q96K37 410 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 C20orf24Q9BUV8 137 aa12.76□□□□□ -0.37
CCDC38-203ENST00000546803 RCL1Q9Y2P8 373 aaKnown RBP12.76□□□□□ -0.37
CCDC38-203ENST00000546803 H3BP45 60 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 GOSR2O14653 212 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 TSC22D2O75157 780 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 IGKV1-17P01599 117 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
CCDC38-203ENST00000546803 IGLC1P0CG04 106 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 PAX9P55771 341 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 IL15RAQ13261 267 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 RGS21Q2M5E4 152 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 DEFB114Q30KQ6 69 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 ACY3Q96HD9 319 aa12.75□□□□□ -0.37
CCDC38-203ENST00000546803 ZNF414Q96IQ9 312 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms