RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PRAF2O60831 178 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 IFNA4P05014 189 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
LTBR-215ENST00000546296 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
LTBR-215ENST00000546296 KRTAP10-11P60412 298 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
LTBR-215ENST00000546296 MLANAQ16655 118 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 CHRDL1Q9BU40 450 aa12.84□□□□□ -0.35
LTBR-215ENST00000546296 F8W735 103 aaPredicted RBP12.83□□□□□ -0.36
LTBR-215ENST00000546296 LGALS9O00182 355 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 CSN3P07498 182 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 CTSGP08311 255 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 FCGR2BP31994 310 aaPredicted RBP12.83□□□□□ -0.36
LTBR-215ENST00000546296 ID3Q02535 119 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 ETFRF1Q6IPR1 90 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
LTBR-215ENST00000546296 OR4D5Q8NGN0 318 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 MARVELD1Q9BSK0 173 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 FNDC4Q9H6D8 234 aaPredicted RBP12.83□□□□□ -0.36
LTBR-215ENST00000546296 PALMDQ9NP74 551 aa12.83□□□□□ -0.36
LTBR-215ENST00000546296 SCGB2A1O75556 95 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 LY86O95711 162 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 SPNP16150 400 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 POLR2GP62487 172 aaKnown RBP eCLIP12.82□□□□□ -0.36
LTBR-215ENST00000546296 RAB11AP62491 216 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 RELQ04864 619 aaPredicted RBP12.82□□□□□ -0.36
LTBR-215ENST00000546296 IL34Q6ZMJ4 242 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
LTBR-215ENST00000546296 UFC1Q9Y3C8 167 aa12.82□□□□□ -0.36
LTBR-215ENST00000546296 C2orf70A6NJV1 201 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 SNRPGP15A8MWD9 76 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 SSSCA1O60232 199 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 YIF1AO95070 293 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 SLC25A4P12235 298 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 ADMP35318 185 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 GSG1LQ6UXU4 331 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 HAPLN4Q86UW8 402 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 OR4X1Q8NH49 305 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
LTBR-215ENST00000546296 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
LTBR-215ENST00000546296 NDUFA4O00483 81 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 CLN5O75503 358 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 TMEM50AO95807 157 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 PTTG1O95997 202 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 FOLR2P14207 255 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 DYNLRB2Q8TF09 96 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 C2orf50Q96LR7 162 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 PSENENQ9NZ42 101 aa12.8□□□□□ -0.36
LTBR-215ENST00000546296 MRPL36Q9P0J6 103 aaKnown RBP12.8□□□□□ -0.36
LTBR-215ENST00000546296 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
LTBR-215ENST00000546296 TRAV30A0A087WSZ9 112 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 C15orf62A8K5M9 175 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 H3BP45 60 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 IGLV1-51P01701 117 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 CBLN1P23435 193 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 GPX4P36969 197 aaPredicted RBP12.79□□□□□ -0.36
LTBR-215ENST00000546296 RND2P52198 227 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 CD69Q07108 199 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 SLC16A13Q7RTY0 426 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 TMEM190Q8WZ59 177 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 ACY3Q96HD9 319 aa12.79□□□□□ -0.36
LTBR-215ENST00000546296 ZNF256Q9Y2P7 627 aaPredicted RBP12.79□□□□□ -0.36
LTBR-215ENST00000546296 IGHV3OR16-8A0A075B7F1 116 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 A8MWP6 167 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 SSNA1O43805 119 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 MBPP02686 304 aaPredicted RBP12.78□□□□□ -0.36
LTBR-215ENST00000546296 ELLP55199 621 aaPredicted RBP12.78□□□□□ -0.36
LTBR-215ENST00000546296 DCTN2Q13561 401 aaKnown RBP12.78□□□□□ -0.36
LTBR-215ENST00000546296 CACNG8Q8WXS5 425 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 SMIM8Q96KF7 97 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 RAB40CQ96S21 281 aa12.78□□□□□ -0.36
LTBR-215ENST00000546296 WI2-2373I1.2A0A1W2PRP0 233 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 TMEM213A2RRL7 107 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 L7N2F9 121 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 GOSR2O14653 212 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.37
LTBR-215ENST00000546296 EDN2P20800 178 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 VAMP2P63027 116 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 TIGITQ495A1 244 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 ADAMTSL5Q6ZMM2 481 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 ZNF600Q6ZNG1 722 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 TMEM116Q8NCL8 245 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 MARC2Q969Z3 335 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 SLC35E1Q96K37 410 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 PRR25Q96S07 402 aa12.77□□□□□ -0.37
LTBR-215ENST00000546296 DAZ1Q9NQZ3 744 aaKnown RBP12.77□□□□□ -0.37
LTBR-215ENST00000546296 TECRQ9NZ01 308 aaKnown RBP12.77□□□□□ -0.37
LTBR-215ENST00000546296 LSM5Q9Y4Y9 91 aaKnown RBP12.77□□□□□ -0.37
LTBR-215ENST00000546296 K7EMT4 169 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms