RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 GINS3Q9BRX5 216 aa8.39□□□□□ -1.07
NECAP1-209ENST00000546181 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-209ENST00000546181 A6NHS1 94 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 IFNA17P01571 189 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 APOA1P02647 267 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 RBMY1A1P0DJD3 496 aaKnown RBP8.38□□□□□ -1.07
NECAP1-209ENST00000546181 RBMY1CP0DJD4 496 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 C4BPBP20851 252 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 S100GP29377 79 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 RCVRNP35243 200 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 PIGPP57054 158 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 TMEM187Q14656 261 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 RBMY1FQ15415 496 aaKnown RBP8.38□□□□□ -1.07
NECAP1-209ENST00000546181 LPCAT3Q6P1A2 487 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 Q8NAQ8 132 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 DUSP18Q8NEJ0 188 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 STXBP6Q8NFX7 210 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 OR4D10Q8NGI6 311 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 SCPEP1Q9HB40 452 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 FAM212BQ9NTI7 297 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-209ENST00000546181 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 KLK11Q9UBX7 282 aa8.38□□□□□ -1.07
NECAP1-209ENST00000546181 IGHV4-28A0A0C4DH34 117 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 IGLL5B9A064 214 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 CD3DP04234 171 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 IFNA4P05014 189 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 SNCAP37840 140 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 NPBWR1P48145 328 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 HOXA1P49639 335 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-209ENST00000546181 AKR1C2P52895 323 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-209ENST00000546181 TIGITQ495A1 244 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 Q6ZRM9 215 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 LHFPL1Q86WI0 220 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 STHQ8IWL8 128 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 C2CD4CQ8TF44 421 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 FUNDC2Q9BWH2 189 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 MFFQ9GZY8 342 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 NAA50Q9GZZ1 169 aaKnown RBP8.37□□□□□ -1.07
NECAP1-209ENST00000546181 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
NECAP1-209ENST00000546181 FAT2Q9NYQ8 4349 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 FAM25AB3EWG3 89 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 FAM25CB3EWG5 89 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 FAM25GB3EWG6 89 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 K7EQG2 157 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 GHRHP01286 108 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 OPRK1P41145 380 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 P2RY1P47900 373 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 RND3P61587 244 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 TRIM16LQ309B1 348 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 PVRIGQ6DKI7 326 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 ZNF767PQ75MW2 155 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
NECAP1-209ENST00000546181 OR52I2Q8NH67 350 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
NECAP1-209ENST00000546181 KIAA1109Q2LD37 5005 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 DNAH2Q9P225 4427 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 A0A087WXM4 84 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 C3orf85A0A1B0GTC6 90 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 CLN5O75503 358 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 NPPCP23582 126 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 HLA-DMBP28068 263 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
NECAP1-209ENST00000546181 ACTL10Q5JWF8 245 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 FAAP20Q6NZ36 180 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 GSG1LQ6UXU4 331 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 Q6ZTC4 211 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 OR13C8Q8NGS7 320 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 LHFPL5Q8TAF8 219 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 X6R8D5 127 aa8.35□□□□□ -1.07
NECAP1-209ENST00000546181 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-209ENST00000546181 INS-IGF2F8WCM5 200 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 NXPH3O95157 252 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 CRYBB3P26998 211 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 SCGB2B2Q4G0G5 96 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 OR4X1Q8NH49 305 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 MARCH1Q8TCQ1 289 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 TMEM230Q96A57 120 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 METTL26Q96S19 204 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 ABHD1Q96SE0 405 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 PDCD10Q9BUL8 212 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 KRTAP9-2Q9BYQ4 174 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 VCX3AQ9NNX9 186 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 EXTL2Q9UBQ6 330 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 CELA1Q9UNI1 258 aa8.34□□□□□ -1.07
NECAP1-209ENST00000546181 CD5P06127 495 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 UCP1P25874 307 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 MEF2DQ14814 521 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 BSXQ3C1V8 233 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 PSMG4Q5JS54 123 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 RNASE11Q8TAA1 199 aaKnown RBP8.33□□□□□ -1.08
NECAP1-209ENST00000546181 TMEM170AQ8WVE7 144 aa8.33□□□□□ -1.08
NECAP1-209ENST00000546181 ZNF486Q96H40 463 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms