RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 TMEM200BQ69YZ2 307 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 RITA1Q96K30 269 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 SH3BGRL2Q9UJC5 107 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 PSMB11A5LHX3 300 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 APOA2P02652 100 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 APELAP0DMC3 54 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 PMCHP20382 165 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
LDLR-204ENST00000545707 Q0VG73 95 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 TEX36Q5VZQ5 186 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 PATE2Q6UY27 113 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 CCL17Q92583 94 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 FLYWCH2Q96CP2 140 aaKnown RBP12.79□□□□□ -0.36
LDLR-204ENST00000545707 DNAJC4Q9NNZ3 241 aa12.79□□□□□ -0.36
LDLR-204ENST00000545707 SRIP30626 198 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 COMPP49747 757 aaPredicted RBP12.78□□□□□ -0.36
LDLR-204ENST00000545707 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
LDLR-204ENST00000545707 TEX43Q6ZNM6 134 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 C19orf35Q6ZS72 473 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 SIGLECL1Q8N7X8 197 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 NEU1Q99519 415 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 ZNF355PQ9NSJ1 428 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 A0A1W2PRE2 83 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 DLL1O00548 723 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 ISLRO14498 428 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 ZNF253O75346 499 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 GPX1P07203 203 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 RAB4AP20338 218 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 DLX1P56177 255 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
LDLR-204ENST00000545707 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
LDLR-204ENST00000545707 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
LDLR-204ENST00000545707 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 BMPR1BO00238 502 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 COX7A2P2O60397 106 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 TDGF1P3P51864 188 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 ADIPOQQ15848 244 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 PRR27Q6MZM9 219 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 Q6ZS92 163 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 FAM19A2Q8N3H0 131 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 RBMXL3Q8N7X1 1067 aaKnown RBP12.77□□□□□ -0.37
LDLR-204ENST00000545707 GAL3ST2Q9H3Q3 398 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 ZZEF1O43149 2961 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 DPRXA6NFQ7 191 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 AMTP48728 403 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 GNG5P63218 68 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 OR5AN1Q8NGI8 311 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 ZNF430Q9H8G1 570 aaPredicted RBP12.77□□□□□ -0.37
LDLR-204ENST00000545707 CDC42EP3Q9UKI2 254 aa12.77□□□□□ -0.37
LDLR-204ENST00000545707 ABCA1O95477 2261 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 IGHV3-21A0A0B4J1V1 117 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 A0A1W2PS18 150 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 A6NNC1 897 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
LDLR-204ENST00000545707 BRS3P32247 399 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
LDLR-204ENST00000545707 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 SMIM27A0A1W2PRY6 76 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 SLC25A17O43808 307 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 SLAQ13239 276 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 C3orf36Q3SXR2 165 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 PNKDQ8N490 385 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 PAXXQ9BUH6 204 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 VAMP8Q9BV40 100 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 C19orf24Q9BVV8 132 aa12.76□□□□□ -0.37
LDLR-204ENST00000545707 IGKV1D-37A0A075B6S9 117 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 MOSP00540 346 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 BATFQ16520 125 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 TMEM177Q53S58 311 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 HCP5Q6MZN7 132 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 WDR73Q6P4I2 378 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 CACNG8Q8WXS5 425 aa12.75□□□□□ -0.37
LDLR-204ENST00000545707 AMY1AP04745 511 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 TNFRSF1AP19438 455 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 BSPH1Q075Z2 132 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 IGFL3Q6UXB1 125 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 TMEM108Q6UXF1 575 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 Q8N976 141 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 BLNKQ8WV28 456 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 SAP30LQ9HAJ7 183 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 H3BTX0 84 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 CORTO00230 105 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 ENSAO43768 121 aaKnown RBP12.74□□□□□ -0.37
LDLR-204ENST00000545707 ORM2P19652 201 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
LDLR-204ENST00000545707 CASP6P55212 293 aa12.74□□□□□ -0.37
LDLR-204ENST00000545707 ZNF329Q86UD4 541 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms