RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 DRAM2Q6UX65 266 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 FAM131AQ6UXB0 335 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 GRINAQ7Z429 371 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
SNHG1-222ENST00000545308 LRRC28Q86X40 367 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-222ENST00000545308 WFDC9Q8NEX5 89 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 OR52E4Q8NGH9 312 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 OR8S1Q8NH09 359 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 MAGOHBQ96A72 148 aaKnown RBP2.34□□□□□ -2.03
SNHG1-222ENST00000545308 CHMP6Q96FZ7 201 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 LINC00477Q96M19 166 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 METTL9Q9H1A3 318 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 DAZ1Q9NQZ3 744 aaKnown RBP2.34□□□□□ -2.03
SNHG1-222ENST00000545308 PLEKHJ1Q9NW61 149 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 POMPQ9Y244 141 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 SLC35A3Q9Y2D2 325 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 RNF11Q9Y3C5 154 aa2.34□□□□□ -2.03
SNHG1-222ENST00000545308 A0A096LPI6 279 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 LCE6AA0A183 80 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 DAPL1A0PJW8 107 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 MFNGO00587 321 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 NDUFA2O43678 99 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 OR2T1O43869 369 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 UBL3O95164 117 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 CDRT1O95170 752 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 PSMG1O95456 288 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 FSTL3O95633 263 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 NRASP01111 189 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 HRASP01112 189 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 KRASP01116 189 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 PDYNP01213 254 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 PRB2P02812 416 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-222ENST00000545308 GUSBP08236 651 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 IL3P08700 152 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 FBP1P09467 338 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 CD79AP11912 226 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 HLA-DMAP28067 261 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 S100A2P29034 98 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 MPV17P39210 176 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 GUCA1AP43080 201 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-222ENST00000545308 IDH2P48735 452 aaKnown RBP2.33□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF117Q03924 483 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 FOXF1Q12946 379 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 TBC1D28Q2M2D7 210 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 DEFB112Q30KQ8 113 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 ARHGAP11BQ3KRB8 267 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 NOXRED1Q6NXP6 359 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 C5orf46Q6UWT4 87 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 NDUFA11Q86Y39 141 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 DEFB108BQ8NET1 73 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 KLF14Q8TD94 323 aaPredicted RBP2.33□□□□□ -2.04
SNHG1-222ENST00000545308 DTD1Q8TEA8 209 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 C16orf78Q8WTQ4 265 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 YIPF5Q969M3 257 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 SMIM12Q96EX1 92 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 C1orf50Q9BV19 199 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 USE1Q9NZ43 259 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 RPUSD1Q9UJJ7 312 aaKnown RBP2.33□□□□□ -2.04
SNHG1-222ENST00000545308 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
SNHG1-222ENST00000545308 IGLV3-9A0A075B6K5 115 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 IGHV3OR16-8A0A075B7F1 116 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 TMED7-TICAM2A0A0A6YYA0 188 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 TRAV40A0A0B4J280 105 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 H3BSA7 217 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 KLHL2O95198 593 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 HLA-AP01891 365 aaKnown RBP2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OCM2P0CE71 109 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 GTF2F2P13984 249 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 CNTFRP26992 372 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 CDC34P49427 236 aaPredicted RBP2.32□□□□□ -2.04
SNHG1-222ENST00000545308 POLR2HP52434 150 aaKnown RBP2.32□□□□□ -2.04
SNHG1-222ENST00000545308 COPZ1P61923 177 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 C1DQ13901 141 aaKnown RBP2.32□□□□□ -2.04
SNHG1-222ENST00000545308 IMPG1Q17R60 797 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OR8A1Q8NGG7 326 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OR8B3Q8NGG8 313 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OR4P4Q8NGL7 312 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 RBPMSQ93062 196 aaKnown RBP2.32□□□□□ -2.04
SNHG1-222ENST00000545308 MAL2Q969L2 176 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 RBP7Q96R05 134 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 OR8B2Q96RD0 313 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 TMEM208Q9BTX3 173 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 TENM2Q9NT68 2774 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 SORL1Q92673 2214 aa2.32□□□□□ -2.04
SNHG1-222ENST00000545308 RYR3Q15413 4870 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 IGHV3-43A0A0B4J1X8 118 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 LOC102725191A0A1B0GVB3 256 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 GMNCA6NCL1 334 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 ZNF98A6NK75 572 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 SMIM23A6NLE4 172 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 F5H768 121 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 K7EIL1 84 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 FAAHO00519 579 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 HPGDSO60760 199 aa2.31□□□□□ -2.04
SNHG1-222ENST00000545308 HMGN2P05204 90 aaKnown RBP2.31□□□□□ -2.04
SNHG1-222ENST00000545308 TFPTP0C1Z6 253 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms