RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 CD24P25063 80 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 MFAP2P55001 183 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 OR1L4Q8NGR5 311 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 PFDN5Q99471 154 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 TMEM242Q9NWH2 141 aa13.27□□□□□ -0.29
CHFR-224ENST00000545046 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 RAB5BP61020 215 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 KIAA0141Q14154 515 aaPredicted RBP13.26□□□□□ -0.29
CHFR-224ENST00000545046 PQLC2Q6ZP29 291 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 IGFBPL1Q8WX77 278 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 YPEL4Q96NS1 127 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 CTDSP1Q9GZU7 261 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 TBL2Q9Y4P3 447 aaKnown RBP13.26□□□□□ -0.29
CHFR-224ENST00000545046 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
CHFR-224ENST00000545046 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 CLDN34H7C241 214 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 COX7A2P2O60397 106 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 NPPCP23582 126 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 UBE2E1P51965 193 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
CHFR-224ENST00000545046 TMEM37Q8WXS4 190 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 MRPL36Q9P0J6 103 aaKnown RBP13.25□□□□□ -0.29
CHFR-224ENST00000545046 YTHDF2Q9Y5A9 579 aaKnown RBP13.25□□□□□ -0.29
CHFR-224ENST00000545046 KLF2Q9Y5W3 355 aaPredicted RBP13.25□□□□□ -0.29
CHFR-224ENST00000545046 OR7C2O60412 319 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 C8orf88P0DMB2 117 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 BPIFB3P59826 476 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 ZNF90Q03938 601 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 C19orf35Q6ZS72 473 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 DYNAPQ8N1N2 210 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 OR51G1Q8NGK1 321 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 FAM168AQ92567 244 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 SPOCK3Q9BQ16 436 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 PIMREGQ9BSJ6 248 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 TNFRSF19Q9NS68 423 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 CACNA1BQ00975 2339 aa13.25□□□□□ -0.29
CHFR-224ENST00000545046 WNK2Q9Y3S1 2297 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 NDUFB4O95168 129 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 FXYD3Q14802 87 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 ELOBQ15370 118 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 MALSU1Q96EH3 234 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 TBX15Q96SF7 602 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 URGCP-MRPS24S4R325 110 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 PRB1P04280 392 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 TRGV9Q99603 122 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 WNT10AQ9GZT5 417 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 LPAR2Q9HBW0 351 aa13.24□□□□□ -0.29
CHFR-224ENST00000545046 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
CHFR-224ENST00000545046 ZFP82Q8N141 532 aa13.23□□□□□ -0.29
CHFR-224ENST00000545046 DOK5Q9P104 306 aa13.23□□□□□ -0.29
CHFR-224ENST00000545046 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
CHFR-224ENST00000545046 EBI3Q14213 229 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 OR1L6Q8NGR2 347 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 Q8WTZ3 238 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 NDUFS8O00217 210 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 TMEM11P17152 192 aa13.22□□□□□ -0.29
CHFR-224ENST00000545046 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
CHFR-224ENST00000545046 ELOA3CA0A087WX78 387 aaPredicted RBP13.21□□□□□ -0.29
CHFR-224ENST00000545046 SCO2A0A1W2PP80 73 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 RNF224P0DH78 156 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 CTRB1P17538 263 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 Q8N6K4 173 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 ZNF503Q96F45 646 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 AKAP6Q13023 2319 aa13.21□□□□□ -0.29
CHFR-224ENST00000545046 FAM106CPP0CH98 169 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 RUSC1-AS1Q66K80 236 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 CLEC2AQ6UVW9 174 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 PATE2Q6UY27 113 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 ANAPC16Q96DE5 110 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 BIN3Q9NQY0 253 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 DMRT1Q9Y5R6 373 aa13.21□□□□□ -0.3
CHFR-224ENST00000545046 OR10J4P0C629 311 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 BRS3P32247 399 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
CHFR-224ENST00000545046 ATP5J2P56134 94 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 FBLN7Q53RD9 439 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 ZNF562Q6V9R5 426 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 OR5T1Q8NG75 326 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
CHFR-224ENST00000545046 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 TGIF2-C20orf24A0A0A6YYL0 155 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 TRAV5A0A0B4J249 113 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 I3L2K1 104 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 CXCL1P09341 107 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 FAM167A-AS1Q96KT0 104 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms