RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TMEM238LA0A1B0GVL6 79 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 A6NJY4 79 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 TIMP3P35625 211 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 CARHSP1Q9Y2V2 147 aaKnown RBP10.63□□□□□ -0.71
CHD4-211ENST00000544484 ZNF407Q9C0G0 2248 aa10.63□□□□□ -0.71
CHD4-211ENST00000544484 DUX3Q96PT4 197 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 A0A1B0GUT8 65 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 SDF2L1Q9HCN8 221 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 PGPEP1LA6NFU8 196 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 A8MXK9 166 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 NPFFO15130 113 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 NUTF2P61970 127 aaKnown RBP10.62□□□□□ -0.71
CHD4-211ENST00000544484 RHOGP84095 191 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 ID3Q02535 119 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 MOB4Q9Y3A3 225 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 SRRM5B3KS81 715 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 APOHP02749 345 aaPredicted RBP10.62□□□□□ -0.71
CHD4-211ENST00000544484 DDTP30046 118 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 BMPERQ8N8U9 685 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 TRAV8-6A0A0B4J262 113 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 GAGE10A6NGK3 116 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 REC114Q7Z4M0 266 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
CHD4-211ENST00000544484 WFDC1Q9HC57 220 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 C1QTNF9P0C862 333 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
CHD4-211ENST00000544484 MLNRO43193 412 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
CHD4-211ENST00000544484 FAM19A2Q8N3H0 131 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 RNF125Q96EQ8 232 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 SNAI2O43623 268 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 RPL23P62829 140 aaKnown RBP10.61□□□□□ -0.71
CHD4-211ENST00000544484 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 VSIRQ9H7M9 311 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 CCL20P78556 96 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 PNRC2Q9NPJ4 139 aaKnown RBP10.61□□□□□ -0.71
CHD4-211ENST00000544484 ZNF581Q9P0T4 197 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 PPP1R17O96001 155 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 KLRD1Q13241 179 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 HIGD1CA8MV81 97 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 COX6CP09669 75 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 TMEM183AQ8IXX5 376 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
CHD4-211ENST00000544484 NAPSAO96009 420 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 TCF23Q7RTU1 214 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 MDS2Q8NDY4 140 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 TNFRSF18Q9Y5U5 241 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 DPRXA6NFQ7 191 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 SRD5A1P18405 259 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 LRTM2Q8N967 370 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 ZNF414Q96IQ9 312 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 SLC25A15Q9Y619 301 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 CD177Q8N6Q3 437 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 WFDC12Q8WWY7 111 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 LINC01587Q99440 93 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 A0A0G2JNJ9 132 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 FABP2P12104 132 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 HTN3P15516 51 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 PRCDQ00LT1 54 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 TMEM219Q86XT9 240 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 Q9UFV3 132 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
CHD4-211ENST00000544484 TBL2Q9Y4P3 447 aaKnown RBP10.6□□□□□ -0.71
CHD4-211ENST00000544484 FER1L6-AS1Q8NA97 138 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 ST6GALNAC3Q8NDV1 305 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
CHD4-211ENST00000544484 NPFFR1Q9GZQ6 430 aa10.6□□□□□ -0.71
CHD4-211ENST00000544484 LY6HO94772 140 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 BEX4Q9NWD9 120 aaPredicted RBP10.59□□□□□ -0.71
CHD4-211ENST00000544484 RLFQ13129 1914 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 ST6GALNAC6Q969X2 333 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 DPH3Q96FX2 82 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 GNLYP22749 145 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 PPIFP30405 207 aaKnown RBP10.59□□□□□ -0.71
CHD4-211ENST00000544484 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
CHD4-211ENST00000544484 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 TRAV5A0A0B4J249 113 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 LDLRAD4O15165 306 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
CHD4-211ENST00000544484 LINC00518Q8N0U6 118 aa10.59□□□□□ -0.71
CHD4-211ENST00000544484 IGHV2-26A0A0B4J1V2 119 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 LINC00205P59089 165 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 EFNB3Q15768 340 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 FBLN7Q53RD9 439 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 CIARTQ8N365 385 aaPredicted RBP10.58□□□□□ -0.72
CHD4-211ENST00000544484 B3GALT5-AS1P59052 145 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 THSD7BQ9C0I4 1608 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
CHD4-211ENST00000544484 LRRK1Q38SD2 2015 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 VDAC2P45880 294 aaPredicted RBP10.58□□□□□ -0.72
CHD4-211ENST00000544484 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 CD33P20138 364 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 CIRBPQ14011 172 aaKnown RBP10.58□□□□□ -0.72
CHD4-211ENST00000544484 TAS2R60P59551 318 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms