RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SAP30O75446 220 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 CTSGP08311 255 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 IL34Q6ZMJ4 242 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 C2orf50Q96LR7 162 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
CD9-210ENST00000543916 OR4C12Q96R67 309 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
CD9-210ENST00000543916 C7orf66A4D0T2 115 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 H3BP45 60 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 SSSCA1O60232 199 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 GNG7O60262 68 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 TMEM50AO95807 157 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
CD9-210ENST00000543916 EDN2P20800 178 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 TATDN3Q17R31 274 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 GSG1LQ6UXU4 331 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 REC114Q7Z4M0 266 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 NOXA1Q86UR1 476 aa11.5□□□□□ -0.57
CD9-210ENST00000543916 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
CD9-210ENST00000543916 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
CD9-210ENST00000543916 NOTCH1P46531 2555 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 LGALS9O00182 355 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 GOSR2O14653 212 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 SIX6O95475 246 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 CSN3P07498 182 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 NPBWR1P48145 328 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 PAX9P55771 341 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 ATP5IP56385 69 aaPredicted RBP11.49□□□□□ -0.57
CD9-210ENST00000543916 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 FAM106AQ4KMX7 169 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 ADAMTSL5Q6ZMM2 481 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 HAPLN4Q86UW8 402 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
CD9-210ENST00000543916 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
CD9-210ENST00000543916 ZNF320A2RRD8 509 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 A8MWP6 167 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 NUPL2O15504 423 aaKnown RBP11.48□□□□□ -0.57
CD9-210ENST00000543916 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
CD9-210ENST00000543916 IFNA4P05014 189 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 INSL3P51460 131 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 CD69Q07108 199 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 IL15RAQ13261 267 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 RGS21Q2M5E4 152 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 SPANXN5Q5MJ07 72 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 SLC16A13Q7RTY0 426 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 PSENENQ9NZ42 101 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 PEMTQ9UBM1 199 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 PAIP2BQ9ULR5 123 aaKnown RBP11.48□□□□□ -0.57
CD9-210ENST00000543916 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
CD9-210ENST00000543916 DNAH3Q8TD57 4116 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 TMEM213A2RRL7 107 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 C2orf70A6NJV1 201 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 PRSS46E5RG02 174 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 K7EPK0 472 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 NDUFA4O00483 81 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 SSNA1O43805 119 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 CLN5O75503 358 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 LY86O95711 162 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 SLC25A4P12235 298 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 RND2P52198 227 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 RAB11AP62491 216 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 RPP30P78346 268 aaKnown RBP11.47□□□□□ -0.57
CD9-210ENST00000543916 DEFA6Q01524 100 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 TMEM116Q8NCL8 245 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 CACNG8Q8WXS5 425 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
CD9-210ENST00000543916 STRAPQ9Y3F4 350 aaKnown RBP11.47□□□□□ -0.57
CD9-210ENST00000543916 LSM5Q9Y4Y9 91 aaKnown RBP11.47□□□□□ -0.57
CD9-210ENST00000543916 RELQ04864 619 aaPredicted RBP11.46□□□□□ -0.57
CD9-210ENST00000543916 RAB32Q13637 225 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 TM4SF20Q53R12 229 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 ETFRF1Q6IPR1 90 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 NPIPB3Q92617 1050 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 ACY3Q96HD9 319 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 RAB40CQ96S21 281 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 C11orf1Q9H5F2 150 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
CD9-210ENST00000543916 CCNKO75909 580 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 FOLR2P14207 255 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 GPX4P36969 197 aaPredicted RBP11.45□□□□□ -0.58
CD9-210ENST00000543916 H2BFSP57053 126 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 TAS2R30P59541 319 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 S100A10P60903 97 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 OXA1LQ15070 435 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 TIGITQ495A1 244 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 WDR89Q96FK6 387 aaPredicted RBP11.45□□□□□ -0.58
CD9-210ENST00000543916 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
CD9-210ENST00000543916 MGAT4CQ9UBM8 478 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms