RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 RFX2P48378 723 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 NKX2-5P52952 324 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 LINC00205P59089 165 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 S100A12P80511 92 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 ZNF85Q03923 595 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 TPBGQ13641 420 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 TAL2Q16559 108 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 SYT6Q5T7P8 510 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 CGB2Q6NT52 195 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 VKORC1L1Q8N0U8 176 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 DUSP18Q8NEJ0 188 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 PXT1Q8NFP0 134 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 OR10G2Q8NGC3 310 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 OR51A4Q8NGJ6 313 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 OR10K1Q8NGX5 313 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 OR2G2Q8NGZ5 317 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 ZNF502Q8TBZ5 544 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 PCNPQ8WW12 178 aaKnown RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 RNF5Q99942 180 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 PARD6GQ9BYG4 376 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 RBM38Q9H0Z9 239 aaKnown RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 HRASLSQ9HDD0 168 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 ZNF230Q9UIE0 474 aaPredicted RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 RCL1Q9Y2P8 373 aaKnown RBP3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 GOLT1BQ9Y3E0 138 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
NPIPB4-219ENST00000543660 IGLV5-37A0A075B6J1 123 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 IGLV2-18A0A075B6J9 118 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TRAV8-7A0A075B6U6 113 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 A0A1W2PQL4 384 aaPredicted RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR5H14A6NHG9 310 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 PPP5D1E7EU14 171 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 GEMIN2O14893 280 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TNFSF12O43508 249 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 YPEL1O60688 119 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 SULT1C4O75897 302 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR7C1O76099 320 aaPredicted RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 S1PR2O95136 353 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 IGKV1-16P04430 117 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 ISG15P05161 165 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 FCGR3AP08637 254 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 SNRPCP09234 159 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 RBMY1A1P0DJD3 496 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 P0DMU3 169 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 FAM231AP0DMU4 169 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 FAM231CP0DMU5 169 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 RCC1P18754 421 aaPredicted RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TBPP20226 339 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 PVALBP20472 110 aaPredicted RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 PPP1CCP36873 323 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 LGALS7P47929 136 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 XGP55808 180 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 RBM11P57052 281 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 FOXI1Q12951 378 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 GUK1Q16774 197 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 MRGPRG-AS1Q2M3A8 158 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 ODF3L2Q3SX64 289 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 NHLRC3Q5JS37 347 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TMEM244Q5VVB8 128 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 UBE2UQ5VVX9 321 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR2T5Q6IEZ7 315 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 GPHB5Q86YW7 130 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 GAPTQ8N292 157 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 ZNF680Q8NEM1 530 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 BEST4Q8NFU0 473 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR2T29Q8NH02 315 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR11H2Q8NH07 326 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 OR4K15Q8NH41 348 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 PYDC1Q8WXC3 89 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 MRPS24Q96EL2 167 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TMEM80Q96HE8 168 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 YPEL2Q96QA6 119 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TBX5Q99593 518 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 RNF126Q9BV68 326 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 NAA50Q9GZZ1 169 aaKnown RBP3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 IFI27L2Q9H2X8 130 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 REEP1Q9H902 201 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 BATF3Q9NR55 127 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 SLC2A9Q9NRM0 540 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 COA4Q9NYJ1 87 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TVP23BQ9NYZ1 205 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TRAPPC2LQ9UL33 140 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 ING4Q9UNL4 249 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 ST3GAL6Q9Y274 331 aa3.49□□□□□ -1.85
NPIPB4-219ENST00000543660 TRAV10A0A0B4J240 114 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 ANKRD20A5PA0PJZ0 165 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 FAM231BA6NCW3 169 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 FAM223BA6NKX1 122 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 A8MWP6 167 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 H3BNX3 289 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 GABRPO00591 440 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 ATP8B1O43520 1251 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 HPGDSO60760 199 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 GGCTO75223 188 aaKnown RBP3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 PROP1O75360 226 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 AMBPP02760 352 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 PRH1P02810 166 aa3.48□□□□□ -1.85
NPIPB4-219ENST00000543660 FABP1P07148 127 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms