RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	GNG7	O60262	68 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	CST7	O76096	145 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	PF4	P02776	101 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	HSPB1	P04792	205 aa	Known RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	SLC25A4	P12235	298 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	GPR183	P32249	361 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	GPX4	P36969	197 aa	Predicted RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	NUP62	P37198	522 aa	Predicted RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	P2RY1	P47900	373 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	CD69	Q07108	199 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	DEFB136	Q30KP8	78 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	FAM209B	Q5JX69	171 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	PVRIG	Q6DKI7	326 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	PRSS54	Q6PEW0	395 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	TMEM14EP	Q6UXP3	125 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	SLC16A13	Q7RTY0	426 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	STX12	Q86Y82	276 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	TMEM217	Q8N7C4	229 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR11H1	Q8NG94	326 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	ZNF502	Q8TBZ5	544 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	ACY3	Q96HD9	319 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	RNF126	Q9BV68	326 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	SLC25A31	Q9H0C2	315 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	RANGRF	Q9HD47	186 aa	Predicted RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	LYRM2	Q9NU23	88 aa	Predicted RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	GAR1	Q9NY12	217 aa	Known RBP	7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	MBD2	Q9UBB5	411 aa		7.86	□□□□□ -1.15
CPSF7-221	ENST00000543545	FXYD6-FXYD2	A0A087WZ82	144 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR2T8	A6NH00	312 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	ADARB2-AS1	A8MUL3	147 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	PPP5D1	E7EU14	171 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	LINC01619	G3V211	115 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	SMLR1	H3BR10	107 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545		I3L521	148 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	NUPL2	O15504	423 aa	Known RBP	7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	SCGB2A1	O75556	95 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	CCNK	O75909	580 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	TRBV12-3	P01733	135 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	ARL3	P36405	182 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	RND2	P52198	227 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545		Q5BKY6	102 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	TMEM252	Q8N6L7	170 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	SPATA3	Q8NHX4	192 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	CACNG8	Q8WXS5	425 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	NPIPB3	Q92617	1050 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	RAX2	Q96IS3	184 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	TXN2	Q99757	166 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	C11orf1	Q9H5F2	150 aa		7.85	□□□□□ -1.15
CPSF7-221	ENST00000543545	IGHV4OR15-8	A0A075B7B6	117 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545		A0A087WW49	117 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	TRAV14DV4	A0A0A6YYC5	116 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	IGSF23	A1L1A6	192 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR2C1	O95371	312 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	ZP3	P21754	424 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	RPL12	P30050	165 aa	Known RBP	7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	MYCNOS	P40205	109 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	SULT1A1	P50225	295 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	HBG1	P69891	147 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	HBG2	P69892	147 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	RUNX1	Q01196	453 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	AKR1C1	Q04828	323 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	ZNF616	Q08AN1	781 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	RPEL1	Q2QD12	228 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	ACOT7L	Q6ZUV0	252 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	AKAP14	Q86UN6	197 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	LILRB2	Q8N423	598 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	OR4X1	Q8NH49	305 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	BSCL2	Q96G97	398 aa	Predicted RBP	7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	CCDC140	Q96MF4	163 aa		7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	MRPL36	Q9P0J6	103 aa	Known RBP	7.84	□□□□□ -1.15
CPSF7-221	ENST00000543545	TRAV30	A0A087WSZ9	112 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	IGHV3-35	A0A0C4DH35	117 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZFP92	A6NM28	416 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	TGOLN2	O43493	480 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	GGCT	O75223	188 aa	Known RBP	7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	CLN5	O75503	358 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	YIF1A	O95070	293 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	SCAF4	O95104	1147 aa	Known RBP	7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	S100A11	P31949	105 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	DLK1	P80370	383 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	NHLH2	Q02577	135 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	SLC38A11	Q08AI6	406 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	ARL16	Q0P5N6	197 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	GAMT	Q14353	236 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	SPSB3	Q6PJ21	355 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF546	Q86UE3	836 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	OR1S2	Q8NGQ3	325 aa		7.83	□□□□□ -1.16
CPSF7-221	ENST00000543545	ZNF320	A2RRD8	509 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	PMS2P5	A8MQ11	134 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	BMPR1B	O00238	502 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	CTSG	P08311	255 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	LYL1	P12980	280 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	OR10J1	P30954	320 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	HOXD3	P31249	432 aa	Predicted RBP	7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	FCGR2B	P31994	310 aa	Predicted RBP	7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	SLURP1	P55000	103 aa		7.82	□□□□□ -1.16
CPSF7-221	ENST00000543545	REL	Q04864	619 aa	Predicted RBP	7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms