RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 LY86O95711 162 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 CLEC3BP05452 202 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 CSN3P07498 182 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 NKX2-1P43699 371 aaPredicted RBP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 SUB1P53999 127 aaKnown RBP eCLIP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 SYNJ2BPP57105 145 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 POLR2GP62487 172 aaKnown RBP eCLIP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 OXA1LQ15070 435 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 TATDN3Q17R31 274 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 RPEL1Q2QD12 228 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 PRSS54Q6PEW0 395 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 SPSB3Q6PJ21 355 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 UNQ9165/PRO28630Q6UXU0 137 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 TMEM116Q8NCL8 245 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 OR9G4Q8NGQ1 327 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 OR4X1Q8NH49 305 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 TMEM190Q8WZ59 177 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 CIB3Q96Q77 187 aaPredicted RBP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 MAGT1Q9H0U3 335 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 HIPK2Q9H2X6 1198 aa7.54□□□□□ -1.2
VEGFB-204ENST00000543462 GPN1Q9HCN4 374 aaPredicted RBP7.54□□□□□ -1.2
VEGFB-204ENST00000543462 K7EPK0 472 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 OR2C1O95371 312 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 IGKV1-17P01599 117 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 IGLV1-51P01701 117 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 IGHV3-48P01763 117 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 C8orf88P0DMB2 117 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 IAPPP10997 89 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 EDN2P20800 178 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 INSL3P51460 131 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 MFAP4P55083 255 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 H2BFSP57053 126 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 CD69Q07108 199 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 MLANAQ16655 118 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 SLC16A13Q7RTY0 426 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 PINX1Q96BK5 328 aaKnown RBP7.53□□□□□ -1.2
VEGFB-204ENST00000543462 SMIM8Q96KF7 97 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 GPR61Q9BZJ8 451 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 ZFAND3Q9H8U3 227 aa7.53□□□□□ -1.2
VEGFB-204ENST00000543462 GAR1Q9NY12 217 aaKnown RBP7.53□□□□□ -1.2
VEGFB-204ENST00000543462 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 C2orf70A6NJV1 201 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 SSSCA1O60232 199 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 TSC22D2O75157 780 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 CLN5O75503 358 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 IGLC1P0CG04 106 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 SLC25A4P12235 298 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 OPRK1P41145 380 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
VEGFB-204ENST00000543462 TAS2R30P59541 319 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 NOXA1Q86UR1 476 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 ZC4H2Q9NQZ6 224 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 ALG5Q9Y673 324 aa7.52□□□□□ -1.21
VEGFB-204ENST00000543462 IGKV1OR2-108A0A075B7D4 117 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 RPS10-NUDT3A0A1W2PQS6 291 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 H3BP45 60 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 WRBO00258 174 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 NDUFA4O00483 81 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 SCAF4O95104 1147 aaKnown RBP7.51□□□□□ -1.21
VEGFB-204ENST00000543462 IFNA10P01566 189 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 GPX4P36969 197 aaPredicted RBP7.51□□□□□ -1.21
VEGFB-204ENST00000543462 RND2P52198 227 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 Q56UQ5 140 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 GSG1LQ6UXU4 331 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 CACNG8Q8WXS5 425 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 WDR89Q96FK6 387 aaPredicted RBP7.51□□□□□ -1.21
VEGFB-204ENST00000543462 NMES1Q9C002 83 aa7.51□□□□□ -1.21
VEGFB-204ENST00000543462 GOSR2O14653 212 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 GNG7O60262 68 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 CCNKO75909 580 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 SIX6O95475 246 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 NPBWR1P48145 328 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 RAB32Q13637 225 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 GAMTQ14353 236 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 THAP8Q8NA92 274 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 UBAC2Q8NBM4 344 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 UXS1Q8NBZ7 420 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 AURKAIP1Q9NWT8 199 aaPredicted RBP7.5□□□□□ -1.21
VEGFB-204ENST00000543462 GSKIPQ9P0R6 139 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 PEMTQ9UBM1 199 aa7.5□□□□□ -1.21
VEGFB-204ENST00000543462 IGHV3-35A0A0C4DH35 117 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 C5orf51A6NDU8 294 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 FNDC10F2Z333 226 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 H0YIZ8 118 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 K7EMT4 169 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 NUPL2O15504 423 aaKnown RBP7.49□□□□□ -1.21
VEGFB-204ENST00000543462 SAP30O75446 220 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 SCGB1D2O95969 90 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 FOLR2P14207 255 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 CXCL3P19876 107 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 CBLN1P23435 193 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 YPEL3P61236 119 aaPredicted RBP7.49□□□□□ -1.21
VEGFB-204ENST00000543462 RELQ04864 619 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms