RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 ELK1P19419 428 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 PI3P19957 117 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 ETV6P41212 452 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 ALDH3B2P48448 385 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 MORN3Q6PF18 240 aaPredicted RBP12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 ARRDC1Q8N5I2 433 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 GRAMD2BQ96HH9 432 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 TP53RKQ96S44 253 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 MRPS26Q9BYN8 205 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 COPZ2Q9P299 210 aa12.7□□□□□ -0.38
PPP1CA-210ENST00000542876 HPGDSO60760 199 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 RNASE2P10153 161 aaKnown RBP12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 SPP1P10451 314 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 NCS1P62166 190 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 RNASE12Q5GAN4 147 aaKnown RBP12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 CCDC71LQ8N9Z2 235 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 OR4X1Q8NH49 305 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
PPP1CA-210ENST00000542876 MIFP14174 115 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 RPL5P46777 297 aaKnown RBP12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 P2RY1P47900 373 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 RORCP51449 518 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 VBP1P61758 197 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 PVRIGQ6DKI7 326 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 Q8NAQ8 132 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 ZFAND1Q8TCF1 268 aa12.68□□□□□ -0.38
PPP1CA-210ENST00000542876 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 IGHV4-28A0A0C4DH34 117 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 RPS10-NUDT3A0A1W2PQS6 291 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 K7EQG2 157 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 CD3DP04234 171 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 P0C879 139 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 TBPP20226 339 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 CRYBB3P26998 211 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PPP5CP53041 499 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PRR20EP86478 221 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PRR20CP86479 221 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PRR20DP86480 221 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PRR20BP86481 221 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 PRR20AP86496 221 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 LHFPL1Q86WI0 220 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 KLK11Q9UBX7 282 aa12.67□□□□□ -0.38
PPP1CA-210ENST00000542876 HELTA6NFD8 242 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 B3GALNT1O75752 331 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 SP6Q3SY56 376 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 ACTL10Q5JWF8 245 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 AP3S1Q92572 193 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 FNDC4Q9H6D8 234 aaPredicted RBP12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 APLNQ9ULZ1 77 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 DNAH10Q8IVF4 4471 aa12.66□□□□□ -0.38
PPP1CA-210ENST00000542876 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 KNCNA6PVL3 124 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 HTR2BP41595 481 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 SPCS3P61009 180 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 DHRS2Q13268 280 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 MLANAQ16655 118 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 TIGITQ495A1 244 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 OR52I2Q8NH67 350 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 TERB2Q8NHR7 220 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 C15orf40Q8WUR7 153 aa12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 MRPL36Q9P0J6 103 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-210ENST00000542876 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 UCP1P25874 307 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 AP2S1P53680 142 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 FAM219AQ8IW50 185 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 OR1S2Q8NGQ3 325 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 OR13C8Q8NGS7 320 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 DCANP1Q8TF63 244 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 Q8WTZ3 238 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 KRTAP17-1Q9BYP8 105 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 HEYLQ9NQ87 328 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 EXTL2Q9UBQ6 330 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 MTFP1Q9UDX5 166 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 TBC1D24Q9ULP9 559 aa12.64□□□□□ -0.39
PPP1CA-210ENST00000542876 RAB3DO95716 219 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 IGKV1-17P01599 117 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 C4BPBP20851 252 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 BSXQ3C1V8 233 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 PSMG4Q5JS54 123 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 Q6ZTC4 211 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
PPP1CA-210ENST00000542876 A0A0G2JRQ6 117 aa12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 HNRNPCP07910 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 SLC25A4P12235 298 aa12.62□□□□□ -0.39
PPP1CA-210ENST00000542876 TAS2R19P59542 299 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms