RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 TOMM20LQ6UXN7 152 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 OR52E5Q8NH55 327 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
CCND1-205ENST00000542367 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 KCNIP3Q9Y2W7 256 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 TMEM56-RWDD3S4R434 201 aa12.2□□□□□ -0.46
CCND1-205ENST00000542367 STARD9Q9P2P6 4700 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 OPRK1P41145 380 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 BSXQ3C1V8 233 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 ZNF600Q6ZNG1 722 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 SCGB3A2Q96PL1 93 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 GINS3Q9BRX5 216 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 HEYLQ9NQ87 328 aaPredicted RBP12.19□□□□□ -0.46
CCND1-205ENST00000542367 MRPL36Q9P0J6 103 aaKnown RBP12.19□□□□□ -0.46
CCND1-205ENST00000542367 CACNG5Q9UF02 275 aa12.19□□□□□ -0.46
CCND1-205ENST00000542367 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCND1-205ENST00000542367 CSMD3Q7Z407 3707 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 CCDC160A6NGH7 325 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 HTR2BP41595 481 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 TFPI2P48307 235 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 TMEM187Q14656 261 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 PRR13Q9NZ81 148 aa12.18□□□□□ -0.46
CCND1-205ENST00000542367 A0A1B0GU03 582 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 CEBPZOSA8MTT3 80 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 CLN5O75503 358 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
CCND1-205ENST00000542367 AKR1C4P17516 323 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 APOC4P55056 127 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 OR4X1Q8NH49 305 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 ST8SIA2Q92186 375 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 IL22RA2Q969J5 263 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
CCND1-205ENST00000542367 IGHV3-66A0A0C4DH42 116 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 NXPH3O95157 252 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 RPL35AP18077 110 aaKnown RBP12.16□□□□□ -0.46
CCND1-205ENST00000542367 PYDC2Q56P42 97 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 TCF24Q7RTU0 167 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 APRG1Q8IVJ8 170 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
CCND1-205ENST00000542367 RPS10-NUDT3A0A1W2PQS6 291 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 CD5P06127 495 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 BMI1P35226 326 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 FAUP35544 74 aaKnown RBP12.15□□□□□ -0.46
CCND1-205ENST00000542367 CMC4P56277 68 aaPredicted RBP12.15□□□□□ -0.46
CCND1-205ENST00000542367 SUPT4H1P63272 117 aaKnown RBP12.15□□□□□ -0.46
CCND1-205ENST00000542367 PAFAH1B2P68402 229 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 KLF9Q13886 244 aaPredicted RBP12.15□□□□□ -0.46
CCND1-205ENST00000542367 ZNF124Q15973 351 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 C2orf83Q53S99 150 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 Q6ZWC4 215 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 V9GYH0 126 aa12.15□□□□□ -0.46
CCND1-205ENST00000542367 TRAV30A0A087WSZ9 112 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 LCE6AA0A183 80 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 UBE2CO00762 179 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 SPRY2O43597 315 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 DFFBO76075 338 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 NPPCP23582 126 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 S100A5P33763 92 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 TIGITQ495A1 244 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 NMSQ5H8A3 153 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 TOMM5Q8N4H5 51 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 STPG3Q8N7X2 389 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 SLC24A4Q8NFF2 622 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 RNASEH2CQ8TDP1 164 aaKnown RBP12.14□□□□□ -0.47
CCND1-205ENST00000542367 TRIM63Q969Q1 353 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
CCND1-205ENST00000542367 A0A0B4J2A0 478 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 DNASE2O00115 360 aaPredicted RBP12.13□□□□□ -0.47
CCND1-205ENST00000542367 IGKV1-17P01599 117 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 ANXA3P12429 323 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 CCR6P51684 374 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 AP3S2P59780 193 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
CCND1-205ENST00000542367 ZNF79Q15937 498 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 PRSS54Q6PEW0 395 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 LGI3Q8N145 548 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 TMEM170AQ8WVE7 144 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 MS4A6AQ9H2W1 248 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 MAP6D1Q9H9H5 199 aa12.13□□□□□ -0.47
CCND1-205ENST00000542367 SHPKQ9UHJ6 478 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms