RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 CCL11P51671 97 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 HLA-DRB5Q30154 266 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 AAED1Q7RTV5 226 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 H2BFWTQ7Z2G1 175 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 TMEM133Q9H2Q1 129 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ZNF665Q9H7R5 613 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 DKK4Q9UBT3 224 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 PIGLQ9Y2B2 252 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 ARL2-SNX15V9GYD0 113 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 CEBPZOSA8MTT3 80 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 KBTBD11O94819 623 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 THBDP07204 575 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 PSG5Q15238 335 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 RBMXL3Q8N7X1 1067 aaKnown RBP9.18□□□□□ -0.94
CDH3-203ENST00000542274 OR5AN1Q8NGI8 311 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 VGLL1Q99990 258 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 NSG2Q9Y328 171 aa9.18□□□□□ -0.94
CDH3-203ENST00000542274 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 TMEM250H0YL14 139 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 CCL1P22362 96 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 FHL3Q13643 280 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 KISS1Q15726 138 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 MBNL2Q5VZF2 373 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 ZNF808Q8N4W9 903 aaPredicted RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 GCSAMQ8N6F7 178 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 TPRX1Q8N7U7 411 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 OR51T1Q8NGJ9 327 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 MRPL30Q8TCC3 161 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 ARHGAP5-AS1Q96IT6 56 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 SGK494Q96LW2 274 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 HILPDAQ9Y5L2 63 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 ANKRD11Q6UB99 2663 aaPredicted RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 MAP1BP46821 2468 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 SAA2-SAA4A0A096LPE2 208 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 A0A096LPE4 126 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 C9JAW5 83 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 C15orf65H3BRN8 121 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 ANGPTL7O43827 346 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 EMP1P54849 157 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 SNU13P55769 128 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 SUPT4H1P63272 117 aaKnown RBP9.17□□□□□ -0.94
CDH3-203ENST00000542274 TSPO2Q5TGU0 170 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 RASL11AQ6T310 242 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 FOXL2NBQ6ZUU3 175 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 MS4A6AQ9H2W1 248 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
CDH3-203ENST00000542274 NBEAQ8NFP9 2946 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 IGLV3-1P01715 115 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 CSN3P07498 182 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 FCGR2AP12318 317 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 PI3P19957 117 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 CRYBB3P26998 211 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 GNG5P63218 68 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 FAM27BQ5VT28 67 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 ADTRPQ96IZ2 230 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 OR4C12Q96R67 309 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 FAM173AQ9BQD7 235 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 C1orf43Q9BWL3 253 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 MAP1LC3AQ9H492 121 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 TRAV24A0A0B4J272 114 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 A0A1W2PPI3 338 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 TIMM8AO60220 97 aaPredicted RBP9.16□□□□□ -0.94
CDH3-203ENST00000542274 DHRS3O75911 302 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 MEOX1P50221 254 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 PLGLB1Q02325 96 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 MZT1Q08AG7 82 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 DEFB109BQ30KR1 87 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 SAMD5Q5TGI4 173 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 FDCSPQ8NFU4 85 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
CDH3-203ENST00000542274 FOXB1Q99853 325 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 TTTY12Q9BZ98 90 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 DUSP13Q9UII6 198 aa9.16□□□□□ -0.94
CDH3-203ENST00000542274 ATMQ13315 3056 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 J3KT08 172 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 WISP2O76076 250 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 GYPAP02724 150 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 CRYGSP22914 178 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 ZNF324BQ6AW86 544 aaPredicted RBP9.15□□□□□ -0.94
CDH3-203ENST00000542274 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.15□□□□□ -0.94
CDH3-203ENST00000542274 DUX3Q96PT4 197 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 KIAA2026Q5HYC2 2103 aa9.15□□□□□ -0.94
CDH3-203ENST00000542274 IGKV1-27A0A075B6S5 117 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 RHODO00212 210 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 SP1P08047 785 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 EVI2AP22794 236 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.95
CDH3-203ENST00000542274 FOXC1Q12948 553 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 RNPS1Q15287 305 aaKnown RBP9.15□□□□□ -0.95
CDH3-203ENST00000542274 LCNL1Q6ZST4 164 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 HOGA1Q86XE5 327 aa9.15□□□□□ -0.95
CDH3-203ENST00000542274 MDS2Q8NDY4 140 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms