RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 PRR20CP86479 221 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 PRR20DP86480 221 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 PRR20BP86481 221 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 PRR20AP86496 221 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 TRIM16LQ309B1 348 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 TIGITQ495A1 244 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 SCGB2B2Q4G0G5 96 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 GINS3Q9BRX5 216 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 FBXL17Q9UF56 701 aa14.49□□□□□ -0.09
DDX11-220ENST00000542244 KLK5Q9Y337 293 aaPredicted RBP14.49□□□□□ -0.09
DDX11-220ENST00000542244 KNCNA6PVL3 124 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 IGKV1-17P01599 117 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 ZNF182P17025 639 aaPredicted RBP14.48□□□□□ -0.09
DDX11-220ENST00000542244 BSXQ3C1V8 233 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 GPR107Q5VW38 600 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 ARRDC1Q8N5I2 433 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 TERB2Q8NHR7 220 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 GATAD1Q8WUU5 269 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 TMEM170AQ8WVE7 144 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 RTBDNQ9BSG5 229 aaPredicted RBP14.48□□□□□ -0.09
DDX11-220ENST00000542244 C6orf62Q9GZU0 229 aaPredicted RBP14.48□□□□□ -0.09
DDX11-220ENST00000542244 RABAC1Q9UI14 185 aa14.48□□□□□ -0.09
DDX11-220ENST00000542244 DNASE2O00115 360 aaPredicted RBP14.47□□□□□ -0.09
DDX11-220ENST00000542244 CTDSP2O14595 271 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 CLN5O75503 358 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 RAB3DO95716 219 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 OR5AC1P0C628 307 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 CMC4P56277 68 aaPredicted RBP14.47□□□□□ -0.09
DDX11-220ENST00000542244 MEF2DQ14814 521 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 RBMS2Q15434 407 aaKnown RBP14.47□□□□□ -0.09
DDX11-220ENST00000542244 MZT2AQ6P582 158 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 TMEM217Q8N7C4 229 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 TMEM229BQ8NBD8 167 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 C11orf45Q8TAV5 145 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 PRR13Q9NZ81 148 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 COPZ2Q9P299 210 aa14.47□□□□□ -0.09
DDX11-220ENST00000542244 AGRNO00468 2067 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 K7EQG2 157 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 NXPH3O95157 252 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 RBMY1A1P0DJD3 496 aaKnown RBP14.46□□□□□ -0.09
DDX11-220ENST00000542244 RBMY1CP0DJD4 496 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 C4BPBP20851 252 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 OPRK1P41145 380 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 PAFAH1B2P68402 229 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 RBMY1FQ15415 496 aaKnown RBP14.46□□□□□ -0.09
DDX11-220ENST00000542244 OR4X1Q8NH49 305 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 GLYATL2Q8WU03 294 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 GPR146Q96CH1 333 aa14.46□□□□□ -0.09
DDX11-220ENST00000542244 C11orf68Q9H3H3 251 aaKnown RBP14.46□□□□□ -0.09
DDX11-220ENST00000542244 ZNF688P0C7X2 276 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 NPPCP23582 126 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 CRYBB3P26998 211 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 P2RY1P47900 373 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 SPCS2Q15005 226 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 STEAP1BQ6NZ63 245 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 SELENOHQ8IZQ5 122 aaKnown RBP14.45□□□□□ -0.1
DDX11-220ENST00000542244 Q8NAQ8 132 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 STXBP6Q8NFX7 210 aa14.45□□□□□ -0.1
DDX11-220ENST00000542244 CDS2O95674 445 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 TMEM187Q14656 261 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 AARDQ4LEZ3 155 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
DDX11-220ENST00000542244 ZFAND1Q8TCF1 268 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 DCANP1Q8TF63 244 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 KRTAP17-1Q9BYP8 105 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 TMEM222Q9H0R3 208 aa14.44□□□□□ -0.1
DDX11-220ENST00000542244 TRAV2A0A0B4J234 112 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 TBPP20226 339 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 RPL5P46777 297 aaKnown RBP14.43□□□□□ -0.1
DDX11-220ENST00000542244 TAS2R19P59542 299 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 LGALS9CQ6DKI2 356 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 PRSS54Q6PEW0 395 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 GSG1LQ6UXU4 331 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 CCDC71LQ8N9Z2 235 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 TMEM230Q96A57 120 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 RRNAD1Q96FB5 475 aaKnown RBP14.43□□□□□ -0.1
DDX11-220ENST00000542244 PDCD10Q9BUL8 212 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 CLEC5AQ9NY25 188 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 CACNG5Q9UF02 275 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 U3KQE9 123 aa14.43□□□□□ -0.1
DDX11-220ENST00000542244 IGHV4-28A0A0C4DH34 117 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 TEX13DA0A0J9YY54 714 aaPredicted RBP14.42□□□□□ -0.1
DDX11-220ENST00000542244 IGLC1P0CG04 106 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 SUB1P53999 127 aaKnown RBP eCLIP14.42□□□□□ -0.1
DDX11-220ENST00000542244 SPCS3P61009 180 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 STHQ8IWL8 128 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 RNASE11Q8TAA1 199 aaKnown RBP14.42□□□□□ -0.1
DDX11-220ENST00000542244 AP3S1Q92572 193 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 NAA60Q9H7X0 242 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 ENY2Q9NPA8 101 aa14.42□□□□□ -0.1
DDX11-220ENST00000542244 GABARAPH6UMI1 98 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 CORTO00230 105 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 CD5P06127 495 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 RND2P52198 227 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 USF2Q15853 346 aaPredicted RBP14.41□□□□□ -0.1
DDX11-220ENST00000542244 OR4C16Q8NGL9 310 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 METTL26Q96S19 204 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 X6R8D5 127 aa14.41□□□□□ -0.1
DDX11-220ENST00000542244 ELOA3CA0A087WX78 387 aaPredicted RBP14.4□□□□□ -0.1
DDX11-220ENST00000542244 ATG12O94817 140 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms