RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 M0QZ24 198 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 TOX4O94842 621 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 BLNKQ8WV28 456 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 DLX1P56177 255 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 GNG5P63218 68 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 RBM14Q96PK6 669 aaKnown RBP12.5□□□□□ -0.41
CNOT9-208ENST00000542068 RNF7Q9UBF6 113 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 CCL3L1P16619 93 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 TNFSF4P23510 183 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 RPL8P62917 257 aaKnown RBP12.5□□□□□ -0.41
CNOT9-208ENST00000542068 CX3CL1P78423 397 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 C10orf55Q5SWW7 151 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 COL5A1-AS1Q5SY13 56 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 RNF2Q99496 336 aa12.5□□□□□ -0.41
CNOT9-208ENST00000542068 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 ENSAO43768 121 aaKnown RBP12.49□□□□□ -0.41
CNOT9-208ENST00000542068 REG1AP05451 166 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 OR5G3P0C626 314 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 FAM215AQ9Y5M1 114 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
CNOT9-208ENST00000542068 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
CNOT9-208ENST00000542068 HSBP1O75506 76 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 PRR20EP86478 221 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 PRR20CP86479 221 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 PRR20DP86480 221 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 PRR20BP86481 221 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 PRR20AP86496 221 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 TMEM167BQ9NRX6 74 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 C9JCJ5 164 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 HYPMO75409 117 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 Q0VG73 95 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 OR4B1Q8NGF8 309 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
CNOT9-208ENST00000542068 LRBAP50851 2863 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 CORTO00230 105 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 AREGP15514 252 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 GLRXP35754 106 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-208ENST00000542068 RPL19P84098 196 aaKnown RBP12.48□□□□□ -0.41
CNOT9-208ENST00000542068 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 PTPRBP23467 1997 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 AMY1AP04745 511 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 TNXAQ16473 311 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 Q8N976 141 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 C1orf162Q8NEQ5 155 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-208ENST00000542068 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 SLC35E1Q96K37 410 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
CNOT9-208ENST00000542068 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
CNOT9-208ENST00000542068 TMPRSS3P57727 454 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 TIMM23BQ5SRD1 257 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 WDR73Q6P4I2 378 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 CLEC7AQ9BXN2 247 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 TMEM14BQ9NUH8 114 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 BTF3P20290 206 aaKnown RBP12.47□□□□□ -0.41
CNOT9-208ENST00000542068 C1orf185Q5T7R7 199 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 DYNLRB1Q9NP97 96 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 COL12A1Q99715 3063 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 TEX50A0A1B0GTY4 177 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 M0R2Z0 102 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 PRRG2O14669 202 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 IGLV1-44P01699 117 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
CNOT9-208ENST00000542068 PIP4P1Q86T03 277 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 NIT1Q86X76 327 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 DDB2Q92466 427 aa12.47□□□□□ -0.41
CNOT9-208ENST00000542068 IGHV1-46P01743 117 aa12.46□□□□□ -0.41
CNOT9-208ENST00000542068 ORM2P19652 201 aa12.46□□□□□ -0.41
CNOT9-208ENST00000542068 ZNF137PP52743 207 aa12.46□□□□□ -0.41
CNOT9-208ENST00000542068 ZNF439Q8NDP4 499 aa12.46□□□□□ -0.41
CNOT9-208ENST00000542068 LAMTOR2Q9Y2Q5 125 aa12.46□□□□□ -0.41
CNOT9-208ENST00000542068 E7EUB6 86 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 COX7A2P2O60397 106 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 SAA1P0DJI8 122 aaPredicted RBP12.46□□□□□ -0.42
CNOT9-208ENST00000542068 TAS2R45P59539 299 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 NEUROG1Q92886 237 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 COMMD5Q9GZQ3 224 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.42
CNOT9-208ENST00000542068 FOXA2Q9Y261 457 aaPredicted RBP12.46□□□□□ -0.42
CNOT9-208ENST00000542068 AMMECR1Q9Y4X0 333 aaPredicted RBP12.46□□□□□ -0.42
CNOT9-208ENST00000542068 KBTBD11-OT1A0A1B0GTJ5 212 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 C8orf88P0DMB2 117 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 CD40P25942 277 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 PTTG1IPP53801 180 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 STUMQ69YW2 141 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 GFRALQ6UXV0 394 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 C19orf35Q6ZS72 473 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 TRGV8A0A0C4DH27 118 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms