RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 OVOL1O14753 267 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 ERVH48-1M5A8F1 160 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
HMGA2-210ENST00000541363 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
HMGA2-210ENST00000541363 FAM90A2PQ658T7 463 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 LINC01560Q8TB33 94 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 CELA2AP08217 269 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 PLXNB2O15031 1838 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 UMODP07911 640 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 SS18Q15532 418 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 MYOFQ9NZM1 2061 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 PAPPA2Q9BXP8 1791 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 NCR2O95944 276 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 IGHMP01871 453 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 C8orf46Q8TAG6 207 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 GTSF1LQ9H1H1 148 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 NBR2O15453 112 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
HMGA2-210ENST00000541363 NPIPB13A6NJU9 1138 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 GLRXP35754 106 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
HMGA2-210ENST00000541363 RHOGP84095 191 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 LIMS1P48059 325 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 TFF2Q03403 129 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 ZP1P60852 638 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 OR10W1Q8NGF6 305 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 SOCS3O14543 225 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 CRYBA2P53672 197 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 A8MXK9 166 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
HMGA2-210ENST00000541363 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
HMGA2-210ENST00000541363 OSTCQ9NRP0 149 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 SCN7AQ01118 1682 aa12.9□□□□□ -0.34
HMGA2-210ENST00000541363 POLR2AP24928 1970 aaKnown RBP12.9□□□□□ -0.35
HMGA2-210ENST00000541363 PEBP1P30086 187 aaKnown RBP12.9□□□□□ -0.35
HMGA2-210ENST00000541363 J3QW42 95 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 FOXS1O43638 330 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 TRACP01848 142 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 ZNF501Q96CX3 271 aaPredicted RBP12.89□□□□□ -0.35
HMGA2-210ENST00000541363 SRXN1Q9BYN0 137 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 RNF125Q96EQ8 232 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 PSG8Q9UQ74 426 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 IGLV1-36A0A0B4J1U3 117 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 PATE3B3GLJ2 98 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 CD33P20138 364 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 PPIFP30405 207 aaKnown RBP12.89□□□□□ -0.35
HMGA2-210ENST00000541363 BCL6BQ8N143 479 aaPredicted RBP12.89□□□□□ -0.35
HMGA2-210ENST00000541363 CHAC1Q9BUX1 264 aa12.89□□□□□ -0.35
HMGA2-210ENST00000541363 SPANXDQ9BXN6 97 aa12.88□□□□□ -0.35
HMGA2-210ENST00000541363 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
HMGA2-210ENST00000541363 SRD5A1P18405 259 aa12.88□□□□□ -0.35
HMGA2-210ENST00000541363 Q6ZT83 130 aa12.88□□□□□ -0.35
HMGA2-210ENST00000541363 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
HMGA2-210ENST00000541363 MLNRO43193 412 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 TMEM258P61165 79 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 ZNF124Q15973 351 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 C19orf48Q6RUI8 117 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 NRTNQ99748 197 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 IGHV3-73A0A0B4J1V6 119 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 CENPVL1A0A0U1RR11 272 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 PAX8Q06710 450 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 TMEM52Q8NDY8 209 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 R3HDMLQ9H3Y0 253 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 LINC00312Q9Y6C7 94 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
HMGA2-210ENST00000541363 TMEM144Q7Z5S9 345 aa12.87□□□□□ -0.35
HMGA2-210ENST00000541363 RAMP1O60894 148 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
HMGA2-210ENST00000541363 PLPPR1Q8TBJ4 325 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 TMEM190Q8WZ59 177 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 LILRA6Q6PI73 481 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 AMELYQ99218 206 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-210ENST00000541363 C15orf61A6NNL5 157 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 NDUFS5O43920 106 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 ZNF876PQ49A33 203 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 C8orf82Q6P1X6 216 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-210ENST00000541363 WFDC12Q8WWY7 111 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 UPK2O00526 184 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 ZXDCQ2QGD7 858 aaPredicted RBP12.86□□□□□ -0.35
HMGA2-210ENST00000541363 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
HMGA2-210ENST00000541363 TRAV41A0A0B4J266 112 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 A6NNC1 897 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 GATA2P23769 480 aaPredicted RBP12.85□□□□□ -0.35
HMGA2-210ENST00000541363 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 PTPRZ1P23471 2315 aaPredicted RBP12.85□□□□□ -0.35
HMGA2-210ENST00000541363 SELLP14151 372 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 SPRED2Q7Z698 418 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 NEUROG3Q9Y4Z2 214 aa12.85□□□□□ -0.35
HMGA2-210ENST00000541363 RASL11AQ6T310 242 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms