RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DPRXA6NFQ7 191 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 CDX4O14627 284 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 APCSP02743 223 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 OR5G3P0C626 314 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 IGLC2P0DOY2 106 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 IGLC3P0DOY3 106 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 CCL3L1P16619 93 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 C18orf32Q8TCD1 76 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 IGF2BP2-AS1Q96M15 143 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 FER1L6-AS2Q96M78 137 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 RNF2Q99496 336 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 FOXA2Q9Y261 457 aaPredicted RBP8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 SELENOKQ9Y6D0 94 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 CEP295Q9C0D2 2601 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 TRGV8A0A0C4DH27 118 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 J3QW42 95 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 F2RL2O00254 374 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 MT-CO2P00403 227 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 MOSP00540 346 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 HNRNPA3P51991 378 aaKnown RBP8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 EBLN2Q6P2I7 272 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 TCF24Q7RTU0 167 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 SPACA3Q8IXA5 215 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 SLC25A2Q9BXI2 301 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 OTOGLQ3ZCN5 2332 aa8.42□□□□□ -1.06
CDC42SE1-207ENST00000540998 H0Y8G0 127 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 AMY1AP04745 511 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 TMEM178AQ8NBL3 297 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 MRPL20Q9BYC9 149 aaKnown RBP8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 GSX1Q9H4S2 264 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 TPSG1Q9NRR2 321 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 SLC35D1Q9NTN3 355 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 SPTA1P02549 2419 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 IGHV3-72A0A0B4J1Y9 119 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 KBTBD11-OT1A0A1B0GTJ5 212 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF439Q8NDP4 499 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF891A8MT65 544 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 M0QZK8 103 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 CCL25O15444 150 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 CGB3P0DN86 165 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 CGB7P0DN87 165 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF137PP52743 207 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF138P52744 262 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 CCL8P80075 99 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 COL5A1-AS1Q5SY13 56 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZC2HC1AQ96GY0 325 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 DKK4Q9UBT3 224 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 LAMTOR2Q9Y2Q5 125 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 WNK2Q9Y3S1 2297 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 GUSBP1Q15486 140 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 BHLHA15Q7RTS1 189 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 NUP35Q8NFH5 326 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 NPIPB3Q92617 1050 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 RITA1Q96K30 269 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 ZNF71Q9NQZ8 489 aaPredicted RBP8.4□□□□□ -1.06
CDC42SE1-207ENST00000540998 UPK2O00526 184 aa8.4□□□□□ -1.07
CDC42SE1-207ENST00000540998 PPOXP50336 477 aa8.4□□□□□ -1.07
CDC42SE1-207ENST00000540998 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.07
CDC42SE1-207ENST00000540998 NUDT11Q96G61 164 aa8.4□□□□□ -1.07
CDC42SE1-207ENST00000540998 COLQQ9Y215 455 aaPredicted RBP8.4□□□□□ -1.07
CDC42SE1-207ENST00000540998 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGLV1-44P01699 117 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 ORM2P19652 201 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 PRCDQ00LT1 54 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 HCP5Q6MZN7 132 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGFBPL1Q8WX77 278 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 GUCD1Q96NT3 240 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 ZNF331Q9NQX6 463 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 OSTCQ9NRP0 149 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 TMEM167BQ9NRX6 74 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 AMMECR1Q9Y4X0 333 aaPredicted RBP8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 HIGD1CA8MV81 97 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 M0R2Z0 102 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 FCN3O75636 299 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 C8orf88P0DMB2 117 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 PRRX1P54821 245 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 TCTAP57738 103 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 MBNL2Q5VZF2 373 aaKnown RBP8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 BORCS7Q96B45 105 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 HARBI1Q96MB7 349 aa8.39□□□□□ -1.07
CDC42SE1-207ENST00000540998 HSBP1O75506 76 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 IGLL1P15814 213 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 PCP4P48539 62 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 WT1-ASQ06250 92 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 GAFA1Q96PS6 74 aa8.38□□□□□ -1.07
CDC42SE1-207ENST00000540998 SLC25A15Q9Y619 301 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms