RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SCGB3A2Q96PL1 93 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 TSPAN32Q96QS1 320 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR2A7Q96R45 310 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR4K3Q96R72 315 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 LYSMD1Q96S90 227 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 PDCD1LG2Q9BQ51 273 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 GINS4Q9BRT9 223 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 SEC11CQ9BY50 192 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 RNASE7Q9H1E1 156 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR52D1Q9H346 318 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 RPP21Q9H633 154 aaKnown RBP3.07□□□□□ -1.92
YBX3-210ENST00000540975 ACER3Q9NUN7 267 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 OR5AC2Q9NZP5 309 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 CCDC167Q9P0B6 97 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 HIGD1AQ9Y241 93 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 HES2Q9Y543 173 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ABCA3Q99758 1704 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 NRXN2Q9P2S2 1712 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 ZSWIM8A7E2V4 1837 aa3.07□□□□□ -1.92
YBX3-210ENST00000540975 TRAV40A0A0B4J280 105 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 A0A0G2JMM0 328 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 FAM236DA0A1B0GTK5 79 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 LOC102725191A0A1B0GVB3 256 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 A0A1W2PPB8 328 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 STRCP1A6NGW2 1772 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 KIR3DP1A8MWS1 328 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 INS-IGF2F8WCM5 200 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 APOC4-APOC2K7ER74 178 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 ZNF682O95780 498 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 APOC2P02655 101 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 CTSDP07339 412 aaPredicted RBP3.06□□□□□ -1.92
YBX3-210ENST00000540975 AKAIN1P0CW23 69 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR12D1P0DN82 309 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 FAM236CP0DP71 79 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 ZNF708P17019 499 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 RAB5AP20339 215 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 NTF3P20783 257 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 BRCA1P38398 1863 aaKnown RBP3.06□□□□□ -1.92
YBX3-210ENST00000540975 POLR2HP52434 150 aaKnown RBP3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR12D2P58182 307 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PDGFRLQ15198 375 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 IQCJQ1A5X6 159 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PYDC2Q56P42 97 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR2T5Q6IEZ7 315 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 SHISA6Q6ZSJ9 500 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 GOLT1AQ6ZVE7 132 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 KRTCAP2Q8N6L1 136 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.06□□□□□ -1.92
YBX3-210ENST00000540975 GPR26Q8NDV2 337 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR11G2Q8NGC1 345 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR4K17Q8NGC6 315 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 OR2T29Q8NH02 315 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PIFOQ8TCI5 191 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PP6455Q8WZ26 134 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PGLYRP3Q96LB9 341 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 HSD17B10Q99714 261 aaKnown RBP3.06□□□□□ -1.92
YBX3-210ENST00000540975 DERL1Q9BUN8 251 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 ZNF355PQ9NSJ1 428 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 NDUFB11Q9NX14 153 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 KLF12Q9Y4X4 402 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 UBIAD1Q9Y5Z9 338 aa3.06□□□□□ -1.92
YBX3-210ENST00000540975 PLXND1Q9Y4D7 1925 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 A0A0G2JMZ2 1700 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 LRRC37A2A6NM11 1700 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 LRRC37AA6NMS7 1700 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 LY75O60449 1722 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 A0A1W2PRS3 328 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 H7BYZ3 331 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 J3QR89 54 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 OR2H2O95918 312 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 TTRP02766 147 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 CSN2P05814 226 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 PIPP12273 146 aaPredicted RBP3.05□□□□□ -1.92
YBX3-210ENST00000540975 CD99P14209 185 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 GABRG2P18507 467 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ATF1P18846 271 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 NFYBP25208 207 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 CNTFRP26992 372 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 SDC2P34741 201 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 GALR1P47211 349 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 DAPP51397 102 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 NCBP2P52298 156 aaKnown RBP eCLIP3.05□□□□□ -1.92
YBX3-210ENST00000540975 FOXA1P55317 472 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 NDUFA6P56556 154 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 PPP1CBP62140 327 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 PSG9Q00887 426 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 TMEM267Q0VDI3 215 aaPredicted RBP3.05□□□□□ -1.92
YBX3-210ENST00000540975 DHRS2Q13268 280 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ZNF880Q6PDB4 577 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 FOXI2Q6ZQN5 318 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 SLC35G3Q8N808 338 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 OR51A4Q8NGJ6 313 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 OR2T27Q8NH04 317 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 JOSD2Q8TAC2 188 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 ZNF502Q8TBZ5 544 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 BORCS7Q96B45 105 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 CHAC1Q9BUX1 264 aa3.05□□□□□ -1.92
YBX3-210ENST00000540975 TMEM59Q9BXS4 323 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms