RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 EBI3Q14213 229 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 ICAM4Q14773 271 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 MMDQ15546 238 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 HAGHQ16775 308 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 MIC13Q5XKP0 118 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 Q8N6K4 173 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 OR2T10Q8NGZ9 312 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 PIFOQ8TCI5 191 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 EAF1Q96JC9 268 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-204ENST00000540846 NKX6-2Q9C056 277 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-204ENST00000540846 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 SLC39A9Q9NUM3 307 aa9.91□□□□□ -0.82
SMAD3-204ENST00000540846 MDFIC2A0A1B0GVS7 189 aa9.9□□□□□ -0.82
SMAD3-204ENST00000540846 CYB5BO43169 146 aa9.9□□□□□ -0.82
SMAD3-204ENST00000540846 HSPB1P04792 205 aaKnown RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 SNRNP70P08621 437 aaKnown RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 RPL29P47914 159 aaKnown RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 CDC34P49427 236 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 FGF8P55075 233 aaPredicted RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 GAMTQ14353 236 aa9.9□□□□□ -0.82
SMAD3-204ENST00000540846 SRSF12Q8WXF0 261 aaKnown RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 RAB24Q969Q5 203 aa9.9□□□□□ -0.82
SMAD3-204ENST00000540846 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.82
SMAD3-204ENST00000540846 GNG13Q9P2W3 67 aa9.9□□□□□ -0.82
SMAD3-204ENST00000540846 FN1P02751 2386 aaKnown RBP9.9□□□□□ -0.83
SMAD3-204ENST00000540846 IGKV1OR2-108A0A075B7D4 117 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 SNAPINO95295 136 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 IFNA1P01562 189 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
SMAD3-204ENST00000540846 AREGP15514 252 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 B2MP61769 119 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRR20EP86478 221 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRR20CP86479 221 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRR20DP86480 221 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRR20BP86481 221 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRR20AP86496 221 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PLGLAQ15195 96 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 DEFB112Q30KQ8 113 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 GCSAMLQ5JQS6 135 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 C22orf15Q8WYQ4 148 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 SLC35E1Q96K37 410 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 ZNF48Q96MX3 618 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-204ENST00000540846 PRDM13Q9H4Q3 707 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 GSX1Q9H4S2 264 aaPredicted RBP9.89□□□□□ -0.83
SMAD3-204ENST00000540846 SLC45A2Q9UMX9 530 aa9.89□□□□□ -0.83
SMAD3-204ENST00000540846 FCN1O00602 326 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 REG1AP05451 166 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 FBP1P09467 338 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 CD24P25063 80 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 GNB1P62873 340 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 C5orf64Q2M2E5 130 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 TEX29Q8N6K0 151 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 STPG3Q8N7X2 389 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 OR1P1Q8NH06 330 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 SSMEM1Q8WWF3 244 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 FNDC4Q9H6D8 234 aaPredicted RBP9.88□□□□□ -0.83
SMAD3-204ENST00000540846 CRYGCP07315 174 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 LINC00869P0C866 280 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 DEFA4P12838 97 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 TAGLN2P37802 199 aaKnown RBP9.88□□□□□ -0.83
SMAD3-204ENST00000540846 MFAP2P55001 183 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 BTN1A1Q13410 526 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 HES1Q14469 280 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
SMAD3-204ENST00000540846 F11RQ9Y624 299 aaKnown RBP9.88□□□□□ -0.83
SMAD3-204ENST00000540846 ZFP92A6NM28 416 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 CORTO00230 105 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 HMGB3O15347 200 aaKnown RBP9.87□□□□□ -0.83
SMAD3-204ENST00000540846 NDUFS6O75380 124 aaKnown RBP9.87□□□□□ -0.83
SMAD3-204ENST00000540846 EIF3GO75821 320 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMAD3-204ENST00000540846 NPBWR1P48145 328 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 ETFRF1Q6IPR1 90 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 THAP8Q8NA92 274 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 MANBALQ9NQG1 85 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 VAX2Q9UIW0 290 aa9.87□□□□□ -0.83
SMAD3-204ENST00000540846 A0A1W2PPV4 95 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 OR10J1P30954 320 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 MLANAQ16655 118 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 SOHLH1Q5JUK2 328 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 RBMS3Q6XE24 437 aaKnown RBP9.86□□□□□ -0.83
SMAD3-204ENST00000540846 Q71RC1 249 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-204ENST00000540846 CYB561D1Q8N8Q1 229 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 CLRN3Q8NCR9 226 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 OR2T6Q8NHC8 308 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 ACY3Q96HD9 319 aa9.86□□□□□ -0.83
SMAD3-204ENST00000540846 TEP1Q99973 2627 aaKnown RBP9.85□□□□□ -0.83
SMAD3-204ENST00000540846 DNASE2O00115 360 aaPredicted RBP9.85□□□□□ -0.83
SMAD3-204ENST00000540846 CNIH1O95406 144 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 STAG3L2P0CL84 134 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 STAG3L3P0CL85 134 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 TMEM11P17152 192 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 HNF1AP20823 631 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 BRS3P32247 399 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 PSMB3P49720 205 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 RHOBP62745 196 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 Q6YL49 198 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
SMAD3-204ENST00000540846 SSX3Q99909 188 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms