RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	WISP2	O76076	250 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TGFA	P01135	160 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ADH4	P08319	380 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CRYBB3	P26998	211 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	S100A7	P31151	101 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PRDX2	P32119	198 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RPEL1	Q2QD12	228 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CCDC144NL	Q6NUI1	221 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TREML4	Q6UXN2	200 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PQLC2	Q6ZP29	291 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR4B1	Q8NGF8	309 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR4P4	Q8NGL7	312 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MGST2	Q99735	147 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HINT2	Q9BX68	163 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GCM1	Q9NP62	436 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	UQCR10	Q9UDW1	63 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PCNX1	Q96RV3	2341 aa		4.64	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HAND1	O96004	215 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PLAU	P00749	431 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MGST1	P10620	155 aa	Known RBP	4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CTRL	P40313	264 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RELB	Q01201	579 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LEMD1	Q68G75	181 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LYG1	Q8N1E2	194 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LINC01356	Q8N9X3	169 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	S1PR3	Q99500	378 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SLC45A2	Q9UMX9	530 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	POLQ	O75417	2590 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ICE1	Q9Y2F5	2266 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZFHX4	Q86UP3	3567 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MYO9A	B2RTY4	2548 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SCGB2A1	O75556	95 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		P0C879	139 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GCHFR	P30047	84 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	BPIFB3	P59826	476 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CATR1	Q13166	79 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		Q56UQ5	140 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF596	Q8TC21	504 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	EAF1	Q96JC9	268 aa	Predicted RBP	4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FOXC2	Q99958	501 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	METRN	Q9UJH8	293 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ABCA4	P78363	2273 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		J3QLI3	93 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		M0QZ24	198 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CXorf1	O96002	111 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	APOA2	P02652	100 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	STAG3L2	P0CL84	134 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	STAG3L3	P0CL85	134 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MYOD1	P15172	320 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GATA2	P23769	480 aa	Predicted RBP	4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ANKRD39	Q53RE8	183 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CENPW	Q5EE01	88 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PRAMEF5	Q5TYX0	476 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		Q6ZR03	302 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR10X1	Q8NGY0	326 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C22orf15	Q8WYQ4	148 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		Q96MF0	132 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GGTLC1	Q9BX51	225 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CLEC7A	Q9BXN2	247 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SELENOK	Q9Y6D0	94 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		V9GYV3	84 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NPIPB11	E5RHQ5	1161 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C19orf84	I3L1E1	186 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RAB29	O14966	203 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR10J4	P0C629	311 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		Q0VG73	95 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	VWC2	Q2TAL6	325 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MIR17HG	Q75NE6	70 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NIT1	Q86X76	327 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GCSAM	Q8N6F7	178 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PSMG3-AS1	Q96PY0	264 aa		4.63	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TNRC6A	Q8NDV7	1962 aa	Known RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CBY3	A6NI87	242 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	BMPR1B	O00238	502 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CA2	P00918	260 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ESD	P10768	282 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TSPO	P30536	169 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GNG4	P50150	75 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MEF2C	Q06413	473 aa	Predicted RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PSG5	Q15238	335 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TMEM136	Q6ZRR5	245 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MOB3B	Q86TA1	216 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR4A16	Q8NH70	328 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FAM216A	Q8WUB2	273 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	BORCS7	Q96B45	105 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MBD6	Q96DN6	1003 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NCKAP5	O14513	1909 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HELT	A6NFD8	242 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF324	O75467	553 aa	Predicted RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ERVK-16	P61578	105 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	COTL1	Q14019	142 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PLGLA	Q15195	96 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	VAMP3	Q15836	100 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MRPL52	Q86TS9	123 aa	Known RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR13A1	Q8NGR1	328 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TSKU	Q8WUA8	353 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	NEUROG1	Q92886	237 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LINC00479	Q96M42	142 aa		4.62	□□□□□ -1.67

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