RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CXCL2P19875 107 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 RPL12P30050 165 aaKnown RBP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 GPX4P36969 197 aaPredicted RBP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 CDX1P47902 265 aaPredicted RBP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 CAV2P51636 162 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 SUB1P53999 127 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 VAMP2P63027 116 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 RPP30P78346 268 aaKnown RBP8.16□□□□□ -1.1
VPS33A-204ENST00000540669 LAMTOR1Q6IAA8 161 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF343Q6P1L6 599 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 ETV3LQ6ZN32 361 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 LCNL1Q6ZST4 164 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 ACOT7LQ6ZUV0 252 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 SLC16A13Q7RTY0 426 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 C9orf62Q8N4C0 152 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 KCNRGQ8N5I3 272 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 THAP6Q8TBB0 222 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 SCARB1Q8WTV0 552 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 DCUN1D4Q92564 292 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 UBE2E2Q96LR5 201 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 CITED1Q99966 193 aa8.16□□□□□ -1.1
VPS33A-204ENST00000540669 IGKV1D-37A0A075B6S9 117 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 FXYD6-FXYD2A0A087WZ82 144 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 A6NJY4 79 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 I3L521 148 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 TRGV3P03979 118 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 OR8U8P0C7N1 319 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 RAB11AP62491 216 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 DEFA5Q01523 94 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 NHLH2Q02577 135 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 OR2F1Q13607 317 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 FHL3Q13643 280 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 C15orf32Q32M92 178 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 ZNF546Q86UE3 836 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 OR5AU1Q8NGC0 362 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 OR4X1Q8NH49 305 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 PINX1Q96BK5 328 aaKnown RBP8.15□□□□□ -1.1
VPS33A-204ENST00000540669 CXorf58Q96LI9 332 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 HYLS1Q96M11 299 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 PARD6GQ9BYG4 376 aaPredicted RBP8.15□□□□□ -1.1
VPS33A-204ENST00000540669 SLC25A31Q9H0C2 315 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 GNB4Q9HAV0 340 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 FBXL7Q9UJT9 491 aa8.15□□□□□ -1.1
VPS33A-204ENST00000540669 DNAH3Q8TD57 4116 aa8.15□□□□□ -1.11
VPS33A-204ENST00000540669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.14□□□□□ -1.11
VPS33A-204ENST00000540669 M0QZ24 198 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 CYB5BO43169 146 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 CST7O76096 145 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 LGALS1P09382 135 aaKnown RBP8.14□□□□□ -1.11
VPS33A-204ENST00000540669 IGLC1P0CG04 106 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 PF4V1P10720 104 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 CD28P10747 220 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 ADMP35318 185 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 TPPP2P59282 170 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 SLC38A11Q08AI6 406 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 GAMTQ14353 236 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 STX12Q86Y82 276 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 OR4X2Q8NGF9 303 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 C4orf3Q8WVX3 66 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 TXN2Q99757 166 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 C21orf62Q9NYP8 219 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 THYN1Q9P016 225 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 FBXL17Q9UF56 701 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
VPS33A-204ENST00000540669 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 A0A0G2JLM5 398 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 RPS10-NUDT3A0A1W2PQS6 291 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 ARPC5O15511 151 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 IFNA4P05014 189 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 DEFA4P12838 97 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 S100A11P31949 105 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 HBG1P69891 147 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 HBG2P69892 147 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 MLANAQ16655 118 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
VPS33A-204ENST00000540669 ZFP69Q49AA0 526 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 FAM209BQ5JX69 171 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 SLC25A24Q6NUK1 477 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 TREML4Q6UXN2 200 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 TMEM144Q7Z5S9 345 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 CENPVQ7Z7K6 275 aaPredicted RBP8.13□□□□□ -1.11
VPS33A-204ENST00000540669 OR10P1Q8NGE3 313 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 OR5C1Q8NGR4 320 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 PPP1R14BQ96C90 147 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 MISP3Q96FF7 219 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 MS4A10Q96PG2 267 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 CITED2Q99967 270 aaPredicted RBP8.13□□□□□ -1.11
VPS33A-204ENST00000540669 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 ARV1Q9H2C2 271 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
VPS33A-204ENST00000540669 BOLA2-SMG1P6H3BVE0 249 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 BMPR1BO00238 502 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 CLN5O75503 358 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 TRBV12-3P01733 135 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 CTSGP08311 255 aa8.12□□□□□ -1.11
VPS33A-204ENST00000540669 OPRK1P41145 380 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms