RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 CGB1A6NKQ9 187 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 TSC22D2O75157 780 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 JTBO76095 146 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 P2RY1P47900 373 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 TAS2R30P59541 319 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 WT1-ASQ06250 92 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 STX12Q86Y82 276 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 TCTE3Q8IZS6 198 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 INO80EQ8NBZ0 244 aaPredicted RBP9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 MISP3Q96FF7 219 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 OR5AC2Q9NZP5 309 aa9.62□□□□□ -0.87
CLSTN3-208ENST00000538933 TRAV14DV4A0A0A6YYC5 116 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 A0A1B0GW64 132 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 NPIPB5A8MRT5 1133 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 INS-IGF2F8WCM5 200 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 EGR2P11161 476 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 CRIP2P52943 208 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 DEFB136Q30KP8 78 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 ZFP69Q49AA0 526 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 TMEM65Q6PI78 240 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 PINX1Q96BK5 328 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 THYN1Q9P016 225 aa9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 F11RQ9Y624 299 aaKnown RBP9.61□□□□□ -0.87
CLSTN3-208ENST00000538933 FAM24AA6NFZ4 105 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 H0YIZ8 118 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 CORTO00230 105 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 SCAF4O95104 1147 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 RNASE2P10153 161 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 SLC25A4P12235 298 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 HIST1H1BP16401 226 aaKnown RBP9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 CTRB1P17538 263 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 C2orf83Q53S99 150 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 Q5BKY6 102 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 ASPHD1Q5U4P2 390 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 CTRB2Q6GPI1 263 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 ZNF546Q86UE3 836 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 OR1P1Q8NH06 330 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 NEURL2Q9BR09 285 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 LYRM2Q9NU23 88 aaPredicted RBP9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 ZNF580Q9UK33 172 aa9.6□□□□□ -0.87
CLSTN3-208ENST00000538933 RPS10-NUDT3A0A1W2PQS6 291 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 H3BUA1 57 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 ARPC5O15511 151 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 C1QBP02746 253 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 PRH1P02810 166 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 TRGV3P03979 118 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 CRYGCP07315 174 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 METTL15P1P0C7V9 234 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 RPL12P30050 165 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 OPRK1P41145 380 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 AP2S1P53680 142 aaPredicted RBP9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 TPPP2P59282 170 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 HBG1P69891 147 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 HBG2P69892 147 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 OR10P1Q8NGE3 313 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 HYLS1Q96M11 299 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 MS4A10Q96PG2 267 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 OR4C12Q96R67 309 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 RNF126Q9BV68 326 aa9.59□□□□□ -0.87
CLSTN3-208ENST00000538933 C15orf62A8K5M9 175 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 OR2J3O76001 311 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 CST7O76096 145 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM50AO95807 157 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 CDX1P47902 265 aaPredicted RBP9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 SULT1A1P50225 295 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 PAX9P55771 341 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 BAXQ07812 192 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 FHL3Q13643 280 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 ETFRF1Q6IPR1 90 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 LCNL1Q6ZST4 164 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM252Q8N6L7 170 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM217Q8N7C4 229 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 RNASEH2CQ8TDP1 164 aaKnown RBP9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 SLA2Q9H6Q3 261 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 FBXL7Q9UJT9 491 aa9.58□□□□□ -0.88
CLSTN3-208ENST00000538933 IGSF23A1L1A6 192 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 SMCO3A2RU48 225 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 INSL3P51460 131 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 EWSR1Q01844 656 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 CD300CQ08708 224 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 TMEM14EPQ6UXP3 125 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 ACOT7LQ6ZUV0 252 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 OR1S2Q8NGQ3 325 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 SLC35E1Q96K37 410 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 MFFQ9GZY8 342 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 C11orf1Q9H5F2 150 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
CLSTN3-208ENST00000538933 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
CLSTN3-208ENST00000538933 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms