RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 NHLH2Q02577 135 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 OR10P1Q8NGE3 313 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 VN1R17PQ8TDU5 208 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 EEF1AKMT3Q96AZ1 226 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 BSCL2Q96G97 398 aaPredicted RBP18.2■□□□□ 0.5
TMEM260-202ENST00000538838 CCDC140Q96MF4 163 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 C21orf62Q9NYP8 219 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 TNFSF18Q9UNG2 199 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 SLC38A11Q08AI6 406 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 ZNF502Q8TBZ5 544 aa18.2■□□□□ 0.5
TMEM260-202ENST00000538838 TSSC4Q9Y5U2 329 aaPredicted RBP18.2■□□□□ 0.5
TMEM260-202ENST00000538838 ARPC5O15511 151 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 CDX1P47902 265 aaPredicted RBP18.19■□□□□ 0.5
TMEM260-202ENST00000538838 ACSM6Q6P461 480 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 C12orf54Q6X4T0 127 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 UBAC2Q8NBM4 344 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 KLHL30-AS1Q8NEE0 82 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 CITED1Q99966 193 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 ZC4H2Q9NQZ6 224 aa18.19■□□□□ 0.5
TMEM260-202ENST00000538838 GPX4P36969 197 aaPredicted RBP18.18■□□□□ 0.5
TMEM260-202ENST00000538838 BAXQ07812 192 aa18.18■□□□□ 0.5
TMEM260-202ENST00000538838 ETFRF1Q6IPR1 90 aa18.18■□□□□ 0.5
TMEM260-202ENST00000538838 AQP10Q96PS8 301 aa18.18■□□□□ 0.5
TMEM260-202ENST00000538838 MDFIQ99750 246 aa18.18■□□□□ 0.5
TMEM260-202ENST00000538838 HSPB11Q9Y547 144 aa18.18■□□□□ 0.5
TMEM260-202ENST00000538838 ANKRD34BA5PLL1 514 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 RNF222A6NCQ9 220 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 F8W735 103 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-202ENST00000538838 PFDN1O60925 122 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 C1QBP02746 253 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 LGALS1P09382 135 aaKnown RBP18.17■□□□□ 0.5
TMEM260-202ENST00000538838 NUP62P37198 522 aaPredicted RBP18.17■□□□□ 0.5
TMEM260-202ENST00000538838 RND2P52198 227 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 HBG1P69891 147 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 HBG2P69892 147 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 ZNF343Q6P1L6 599 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 LILRB2Q8N423 598 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 ACY3Q96HD9 319 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 SLC35E1Q96K37 410 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 STAB1Q9NY15 2570 aa18.17■□□□□ 0.5
TMEM260-202ENST00000538838 TRBV7-1A0A0A6YYK4 115 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 ADARB2-AS1A8MUL3 147 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 NUDT19A8MXV4 375 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 SCAF4O95104 1147 aaKnown RBP18.16■□□□□ 0.5
TMEM260-202ENST00000538838 TRBV12-3P01733 135 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 MFAP4P55083 255 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 DLK1P80370 383 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 GAMTQ14353 236 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 Q56UQ5 140 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 CLEC19AQ6UXS0 136 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 INO80EQ8NBZ0 244 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-202ENST00000538838 OR5C1Q8NGR4 320 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 C4orf3Q8WVX3 66 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 CACNG8Q8WXS5 425 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 I3L521 148 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 GPR183P32249 361 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 AP2S1P53680 142 aaPredicted RBP18.16■□□□□ 0.5
TMEM260-202ENST00000538838 DEFB136Q30KP8 78 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 NSUN5P1Q3KNT7 163 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 C3orf56Q8N813 242 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 ZNF747Q9BV97 191 aa18.16■□□□□ 0.5
TMEM260-202ENST00000538838 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.15■□□□□ 0.5
TMEM260-202ENST00000538838 SMCO3A2RU48 225 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 OR2T8A6NH00 312 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 S100A11P31949 105 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 CLINT1Q14677 625 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 C8orf86Q6ZUL3 223 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 NDUFA11Q86Y39 141 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 TMEM116Q8NCL8 245 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 OR1S2Q8NGQ3 325 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 OR4X1Q8NH49 305 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 NPIPB3Q92617 1050 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 SMIM3Q9BZL3 60 aa18.15■□□□□ 0.5
TMEM260-202ENST00000538838 PPP5D1E7EU14 171 aa18.14■□□□□ 0.49
TMEM260-202ENST00000538838 ZFP69Q49AA0 526 aa18.14■□□□□ 0.49
TMEM260-202ENST00000538838 MFFQ9GZY8 342 aa18.14■□□□□ 0.49
TMEM260-202ENST00000538838 HMSDA8MTL9 139 aa18.13■□□□□ 0.49
TMEM260-202ENST00000538838 GNG7O60262 68 aa18.13■□□□□ 0.49
TMEM260-202ENST00000538838 CLEC3BP05452 202 aa18.13■□□□□ 0.49
TMEM260-202ENST00000538838 FCGR2BP31994 310 aaPredicted RBP18.13■□□□□ 0.49
TMEM260-202ENST00000538838 NPBWR1P48145 328 aa18.13■□□□□ 0.49
TMEM260-202ENST00000538838 AKR1C1Q04828 323 aa18.13■□□□□ 0.49
TMEM260-202ENST00000538838 CLN5O75503 358 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 TXN2Q99757 166 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 TMEM147Q9BVK8 224 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 GGACTQ9BVM4 153 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 PEF1Q9UBV8 284 aaKnown RBP18.12■□□□□ 0.49
TMEM260-202ENST00000538838 FBXL17Q9UF56 701 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 UBE2L5PA0A1B0GUS4 154 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 ARL3P36405 182 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 EIF2B2P49770 351 aaKnown RBP18.12■□□□□ 0.49
TMEM260-202ENST00000538838 RUNX1Q01196 453 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 DUX3Q96PT4 197 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 UQCC1Q9NVA1 299 aa18.12■□□□□ 0.49
TMEM260-202ENST00000538838 IGHV4OR15-8A0A075B7B6 117 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 A0A087WW49 117 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 FNDC10F2Z333 226 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 TGOLN2O43493 480 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 CXCL2P19875 107 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 VWC2Q2TAL6 325 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms