RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 SMCO1Q147U7 214 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 UBAC2Q8NBM4 344 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 GINS3Q9BRX5 216 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 HIPK2Q9H2X6 1198 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 TUBA4BQ9H853 241 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 HSPB7Q9UBY9 170 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 U3KQ87 197 aa9.25□□□□□ -0.93
CLTCL1-205ENST00000538828 FAM90A26D6RGX4 464 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 CLN5O75503 358 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 TMEM50AO95807 157 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 TNFRSF9Q07011 255 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 ETFRF1Q6IPR1 90 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 BTNL8Q6UX41 500 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 ZNF600Q6ZNG1 722 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 RBPMS2Q6ZRY4 209 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 CENPSQ8N2Z9 138 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 TMEM116Q8NCL8 245 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 CACNG8Q8WXS5 425 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 WDR89Q96FK6 387 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 ZNF414Q96IQ9 312 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 TMED3Q9Y3Q3 217 aa9.24□□□□□ -0.93
CLTCL1-205ENST00000538828 IGHV3-21A0A0B4J1V1 117 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 CENPXA8MT69 81 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 PITX3O75364 302 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 NDUFB6O95139 128 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 INPP1P49441 399 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 CMC4P56277 68 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 GUCA2BQ16661 112 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 TRIQKQ629K1 86 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 SLC24A4Q8NFF2 622 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 ASCL2Q99929 193 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 HEYLQ9NQ87 328 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-205ENST00000538828 TRAV14DV4A0A0A6YYC5 116 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 CEBPZOSA8MTT3 80 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 OR11H12B2RN74 326 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 SFT2D2O95562 160 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 CD7P09564 240 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 EDN2P20800 178 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 NPY1RP25929 384 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 OPRK1P41145 380 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 BAK1Q16611 211 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 HAGHQ16775 308 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 LYZL2Q7Z4W2 148 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 OR52B4Q8NGK2 314 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 SDHCQ99643 169 aaPredicted RBP9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 C20orf24Q9BUV8 137 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
CLTCL1-205ENST00000538828 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.93
CLTCL1-205ENST00000538828 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 A0A1W2PS18 150 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 OR4C46A6NHA9 309 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 C3orf84H3BNL1 204 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 CHEK1O14757 476 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 MED6O75586 246 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 YPEL3P61236 119 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 FAM90A2PQ658T7 463 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 TOMM20LQ6UXN7 152 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 TMED4Q7Z7H5 227 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 DTD1Q8TEA8 209 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 CIB3Q96Q77 187 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 CITED4Q96RK1 184 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 TMEM231Q9H6L2 316 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
CLTCL1-205ENST00000538828 YIF1AO95070 293 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 SCAF4O95104 1147 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 IGKV1-17P01599 117 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 IL7P13232 177 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 VAMP1P23763 118 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 PRSS54Q6PEW0 395 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 CCDC32Q9BV29 185 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 SRD5A3Q9H8P0 318 aa9.2□□□□□ -0.94
CLTCL1-205ENST00000538828 IGLC1P0CG04 106 aa9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 CRYBB3P26998 211 aa9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 GPX4P36969 197 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 DEFB125Q8N687 156 aa9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 OR1S1Q8NH92 325 aa9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 TMEM170AQ8WVE7 144 aa9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 PUS1Q9Y606 427 aaKnown RBP eCLIP9.19□□□□□ -0.94
CLTCL1-205ENST00000538828 C9orf170A2RU37 121 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 RBMY1BA6NDE4 496 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 RBMY1EA6NEQ0 496 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 IFNA10P01566 189 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 IGHV3-48P01763 117 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 RBMY1DP0C7P1 496 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 NPPCP23582 126 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 PAFAH1B2P68402 229 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 RPP30P78346 268 aaKnown RBP9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 COQ8AQ8NI60 647 aa9.18□□□□□ -0.94
CLTCL1-205ENST00000538828 S100ZQ8WXG8 99 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms