RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 A0A1W2PPB8 328 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 OR2T8A6NH00 312 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 KIR3DP1A8MWS1 328 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 ZNHIT1O43257 154 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 SPINT2O43291 252 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 HIST1H1AQ02539 215 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-209ENST00000538654 PMS2CLQ68D20 193 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 FAM214BQ7L5A3 538 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 WDR86Q86TI4 376 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 CLCF1Q9UBD9 225 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 TCF19Q9Y242 345 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
SNHG1-209ENST00000538654 EPOPA6NHQ4 379 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 C21orf140B9A014 251 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 SYS1-DBNDD2H3BUS1 97 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 OR7C2O60412 319 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 PSPNO60542 156 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 TNFSF15O95150 251 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 OR5AL1P0C617 328 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 SPINK2P20155 84 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 SSTR5P35346 364 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 CA7P43166 264 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 AESQ08117 197 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 FOXF2Q12947 444 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 SLC25A40Q8TBP6 338 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 NEUROG1Q92886 237 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 MBD6Q96DN6 1003 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 NABP2Q9BQ15 211 aa7.4□□□□□ -1.22
SNHG1-209ENST00000538654 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 CORTO00230 105 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 SP1P08047 785 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 RFPL3SP0C7P2 107 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 PSG9Q00887 426 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 MUC21Q5SSG8 566 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 STHQ8IWL8 128 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 DUSP13Q9UII6 198 aa7.4□□□□□ -1.23
SNHG1-209ENST00000538654 HCFC1P51610 2035 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 GGTLC3B5MD39 225 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 MT-CO3P00414 261 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 HIST1H1EP10412 219 aaKnown RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 RPL8P62917 257 aaKnown RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 NUP35Q8NFH5 326 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 SAP25Q8TEE9 199 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 DUSP23Q9BVJ7 150 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 MED12LQ86YW9 2145 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 KIAA0100Q14667 2235 aaKnown RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 PTPRBP23467 1997 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 MBD3L4A6NDZ8 208 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 MBD3L3A6NE82 208 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 IGFBP2P18065 325 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 SEC11AP67812 179 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 TBC1D28Q2M2D7 210 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 OR2Y1Q8NGV0 311 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 S1PR3Q99500 378 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 MRPL32Q9BYC8 188 aaKnown RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
SNHG1-209ENST00000538654 BOKQ9UMX3 212 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-209ENST00000538654 C15orf61A6NNL5 157 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 GUSBP11Q6P575 273 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 TCF24Q7RTU0 167 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 COQ2Q96H96 371 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF355PQ9NSJ1 428 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 ABI3Q9P2A4 366 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 SOX21Q9Y651 276 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-209ENST00000538654 KLF7O75840 302 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-209ENST00000538654 CNIH1O95406 144 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 NBEAP1P0C6P0 100 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 C8orf88P0DMB2 117 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 FOXG1P55316 489 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-209ENST00000538654 HSPE1P61604 102 aaKnown RBP7.38□□□□□ -1.23
SNHG1-209ENST00000538654 OR4S2Q8NH73 311 aa7.38□□□□□ -1.23
SNHG1-209ENST00000538654 FOXA2Q9Y261 457 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-209ENST00000538654 SDK2Q58EX2 2172 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 CA1P00915 261 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 SP9P0CG40 484 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 GPR183P32249 361 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FOLR3P41439 243 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 LINC00205P59089 165 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FAM120AOSQ5T036 256 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 GDF5OSQ5U4N7 250 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FAM53AQ6NSI3 398 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 SSBP3Q9BWW4 388 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 JPT1Q9UK76 154 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
SNHG1-209ENST00000538654 IGHV3-43A0A0B4J1X8 118 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 IGHV3-43DP0DP04 118 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 KIR3DL3Q8N743 410 aa7.37□□□□□ -1.23
SNHG1-209ENST00000538654 FAM168AQ92567 244 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms