RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MOB3BQ86TA1 216 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 CD177Q8N6Q3 437 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 CHCHD1Q96BP2 118 aaKnown RBP15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 TMEM191AQ9H0A3 160 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 IDI2-AS1Q9NZ38 188 aa15.18■□□□□ 0.02
SFSWAP-207ENST00000538548 NTN3O00634 580 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 LOXL3P58215 753 aa15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 GAGE12BA1L429 117 aa15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 SH2D7A6NKC9 451 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 OR51B2Q9Y5P1 312 aa15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 ZFHX2Q9C0A1 2572 aaPredicted RBP15.17■□□□□ 0.02
SFSWAP-207ENST00000538548 IGHV1-24A0A0C4DH33 117 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 LEPROTL1O95214 131 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 IGHV3-13P01766 116 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 IGHV3-7P01780 117 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 PSG9Q00887 426 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 TMEM251Q8N6I4 163 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 FAM167A-AS1Q96KT0 104 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 SCRT2Q9NQ03 307 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 SLC25A2Q9BXI2 301 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 NCOR1P1Q9H4R4 102 aa15.16■□□□□ 0.02
SFSWAP-207ENST00000538548 BOD1L1Q8NFC6 3051 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 F2RL2O00254 374 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 PRDX2P32119 198 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 C1orf229Q6ZS94 237 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 PCSK5Q92824 1860 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 VWC2LB2RUY7 222 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 PEX7O00628 323 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 MYOD1P15172 320 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 SMIM12Q96EX1 92 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 PEF1Q9UBV8 284 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 PRNDQ9UKY0 176 aa15.15■□□□□ 0.02
SFSWAP-207ENST00000538548 CORTO00230 105 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 HBBP68871 147 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 PRCDQ00LT1 54 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 HIST1H1AQ02539 215 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 CR1LQ2VPA4 569 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 SSX8Q7RTT4 187 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF257Q9Y2Q1 563 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 LINC00173Q6ZV60 143 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 OR9G1Q8NH87 305 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 ARRDC1-AS1Q9H2J1 176 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 C7orf69Q9H7B7 122 aa15.14■□□□□ 0.01
SFSWAP-207ENST00000538548 PSMB11A5LHX3 300 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 CER1O95813 267 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 POU2AF1Q16633 256 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 MORN5Q5VZ52 161 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF329Q86UD4 541 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 MS4A6AQ9H2W1 248 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 TRAV5A0A0B4J249 113 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 M0R296 226 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 C2orf83Q53S99 150 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 ABHD17BQ5VST6 288 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 PET117Q6UWS5 81 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 LRRC29Q8WV35 223 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF835Q9Y2P0 537 aa15.13■□□□□ 0.01
SFSWAP-207ENST00000538548 TRAV8-6A0A0B4J262 113 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 MGST3O14880 152 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 OR5AL1P0C617 328 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 FOXA3P55318 350 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 CT55Q8WUE5 264 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 TNCP24821 2201 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 LIPFP07098 398 aa15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 SAA2P0DJI9 122 aaPredicted RBP15.12■□□□□ 0.01
SFSWAP-207ENST00000538548 TIMM8AO60220 97 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 PPP1R35Q8TAP8 253 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF714Q96N38 554 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 MAP1LC3CQ9BXW4 147 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 SOX21Q9Y651 276 aaPredicted RBP15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 IGLC1P0CG04 106 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 CD69Q07108 199 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 ADTRPQ96IZ2 230 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 PAXXQ9BUH6 204 aa15.11■□□□□ 0.01
SFSWAP-207ENST00000538548 IGKV1D-17A0A075B6S4 117 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 A0A087X0K7 114 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 SP9P0CG40 484 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 PYYP10082 97 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 OR1L8Q8NGR8 309 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 CALYQ9NYX4 217 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 TMEM238C9JI98 176 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 GPR183P32249 361 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 DUSP3P51452 185 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 MLANAQ16655 118 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 CT45A1Q5HYN5 189 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 INO80CQ6PI98 192 aaPredicted RBP15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 CT45A3Q8NHU0 189 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 H1FXQ92522 213 aaKnown RBP15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 MEGF9Q9H1U4 602 aa15.1■□□□□ 0.01
SFSWAP-207ENST00000538548 UPK2O00526 184 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 IGHV1-2P23083 117 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 S100A7P31151 101 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 C6orf15Q6UXA7 325 aaPredicted RBP15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 ZNF841Q6ZN19 808 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 TCF24Q7RTU0 167 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 LEAP2Q969E1 77 aa15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 RNASE2P10153 161 aaKnown RBP15.09■□□□□ 0.01
SFSWAP-207ENST00000538548 PRR31Q5SQ13 230 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms