RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 LYPD3O95274 346 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 PCOLCEQ15113 449 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 GUSBP1Q15486 140 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 PEAR1Q5VY43 1037 aaPredicted RBP5.79□□□□□ -1.48
SORT1-209ENST00000538502 CLEC2AQ6UVW9 174 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 PPP1R27Q86WC6 154 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 SP7Q8TDD2 431 aaPredicted RBP5.79□□□□□ -1.48
SORT1-209ENST00000538502 GFI1Q99684 422 aa5.79□□□□□ -1.48
SORT1-209ENST00000538502 DOCK5Q9H7D0 1870 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 GREM1O60565 184 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 LHFPL4Q7Z7J7 247 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 KLF12Q9Y4X4 402 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 PARP14Q460N5 1801 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 FOXH1O75593 365 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 NAPSAO96009 420 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 UCNP55089 124 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 Q6ZS49 121 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 SLC22A18ASQ8N1D0 253 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 FBXL7Q9UJT9 491 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 IGLV3-32A0A0A0MS00 114 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 TRBV6-6A0A0A6YYG2 114 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 H3BTX0 84 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 TDGF1P13385 188 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 C2orf82Q6UX34 121 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 ADAMTSL5Q6ZMM2 481 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 TMEM86BQ8N661 226 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 NEUROG3Q9Y4Z2 214 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 C9orf118A6NHY6 69 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 PLSCR4Q9NRQ2 329 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 DPM3Q9P2X0 92 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 TMEM8BA6NDV4 472 aa5.78□□□□□ -1.48
SORT1-209ENST00000538502 RPP25Q9BUL9 199 aaKnown RBP5.78□□□□□ -1.48
SORT1-209ENST00000538502 IGKV3D-15A0A087WSY6 115 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 IGKV3-15P01624 115 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 PAQR4Q8N4S7 273 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 OR13A1Q8NGR1 328 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 SCN8AQ9UQD0 1980 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 ADAMTSL1Q8N6G6 1762 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 FAM231BA6NCW3 169 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 TMEM14EPQ6UXP3 125 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 GTSF1LQ9H1H1 148 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 POLR3KQ9Y2Y1 108 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 TGFAP01135 160 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 SAA1P0DJI8 122 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 RNASE4P34096 147 aaKnown RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 MORN2Q502X0 79 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 RNF125Q96EQ8 232 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 GGTLC1Q9BX51 225 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 A0A0G2JMZ2 1700 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 LRRC37A2A6NM11 1700 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 IGKV3D-11A0A0A0MRZ8 115 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 A0A0A6YYD4 124 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 GNG5P63218 68 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 MPV17L2Q567V2 206 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 NEGR1Q7Z3B1 354 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 TRGV9Q99603 122 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 RSPO3Q9BXY4 272 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 RNF115Q9Y4L5 304 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 NUP214P35658 2090 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 EFEMP2O95967 443 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 SPATA31B1PQ5VZV4 182 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 TREML4Q6UXN2 200 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 DTX1Q86Y01 620 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 LEAP2Q969E1 77 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 ATP6V0BQ99437 205 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 NMSQ5H8A3 153 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 TMEM42Q69YG0 159 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 PRR7Q8TB68 274 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
SORT1-209ENST00000538502 DUX3Q96PT4 197 aa5.77□□□□□ -1.49
SORT1-209ENST00000538502 PRRC2BQ5JSZ5 2229 aaKnown RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 TRGV3P03979 118 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 MYOD1P15172 320 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 TAL2Q16559 108 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 CHAC1Q9BUX1 264 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 MRPL20Q9BYC9 149 aaKnown RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 IGKV1D-13A0A0B4J2D9 117 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 IGKV1-13P0DP09 117 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 CD28P10747 220 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 DEFB124Q8NES8 71 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 PPDPFLQ8WWR9 84 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 EDA2RQ9HAV5 297 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 SAA2-SAA4A0A096LPE2 208 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 A0A1B0GWJ7 208 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 EREGO14944 169 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 SIVA1O15304 175 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 ZIC3O60481 467 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 TOMM40O96008 361 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 SAA2P0DJI9 122 aaPredicted RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 PDLIM4P50479 330 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 SUPT4H1P63272 117 aaKnown RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 NUP35Q8NFH5 326 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 ZNF492Q9P255 531 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 CHCHD2Q9Y6H1 151 aaPredicted RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 K7EP34 96 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 INAFM2P0DMQ5 153 aa5.76□□□□□ -1.49
SORT1-209ENST00000538502 APOBEC3AP31941 199 aaPredicted RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 DUTP33316 252 aaKnown RBP5.76□□□□□ -1.49
SORT1-209ENST00000538502 UTF1Q5T230 341 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms