RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CNTFRP26992 372 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 MRGPRG-AS1Q2M3A8 158 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 C9orf152Q5JTZ5 239 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 MUC15Q8N387 334 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 DNAJC4Q9NNZ3 241 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 CNN1P51911 297 aaKnown RBP20.05■□□□□ 0.8
RAB40C-204ENST00000538492 SUB1P53999 127 aaKnown RBP eCLIP20.05■□□□□ 0.8
RAB40C-204ENST00000538492 ERVFC1-1P60608 527 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 RNASEH2CQ8TDP1 164 aaKnown RBP20.05■□□□□ 0.8
RAB40C-204ENST00000538492 SLC25A2Q9BXI2 301 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 ARL2-SNX15V9GYD0 113 aa20.05■□□□□ 0.8
RAB40C-204ENST00000538492 IGHV2-26A0A0B4J1V2 119 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 SIAH2O43255 324 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 HCP5Q6MZN7 132 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 PDLIM4P50479 330 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 C19orf35Q6ZS72 473 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 FAM167A-AS1Q96KT0 104 aa20.04■□□□□ 0.8
RAB40C-204ENST00000538492 OR5AU1Q8NGC0 362 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 BTF3L4Q96K17 158 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 CHODLQ9H9P2 273 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 COX7A2P2O60397 106 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 CASP6P55212 293 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 UBE2L3P68036 154 aaKnown RBP20.03■□□□□ 0.8
RAB40C-204ENST00000538492 RUSC1-AS1Q66K80 236 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 IL36BQ9NZH7 164 aa20.03■□□□□ 0.8
RAB40C-204ENST00000538492 IGKV1D-37A0A075B6S9 117 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 MRPL32Q9BYC8 188 aaKnown RBP20.02■□□□□ 0.8
RAB40C-204ENST00000538492 A0A1B0GUS0 222 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 SNRPCP09234 159 aaKnown RBP20.02■□□□□ 0.8
RAB40C-204ENST00000538492 PYYP10082 97 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 LGALS7P47929 136 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 TNXAQ16473 311 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 ZNF841Q6ZN19 808 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 LY96Q9Y6Y9 160 aa20.02■□□□□ 0.8
RAB40C-204ENST00000538492 COX7A1P24310 79 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 MISP3Q96FF7 219 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 ZNF355PQ9NSJ1 428 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 TCRBV4S1A1TA0A5B7 111 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 CCL21O00585 134 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 LGALS4P56470 323 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 C10orf113Q5VZT2 155 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 PATE2Q6UY27 113 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 ATRXP46100 2492 aa20.01■□□□□ 0.79
RAB40C-204ENST00000538492 IGLV1-47P01700 117 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 CBLN1P23435 193 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 RNASE7Q9H1E1 156 aaKnown RBP20■□□□□ 0.79
RAB40C-204ENST00000538492 A0A1W2PRE2 83 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 IGLC7A0M8Q6 106 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 ADMP35318 185 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 CDSNQ15517 529 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 INSIG2Q9Y5U4 225 aa20■□□□□ 0.79
RAB40C-204ENST00000538492 CA7P43166 264 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 PRRX1P54821 245 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 V9GYV3 84 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 IGHV3-21A0A0B4J1V1 117 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 LY6HO94772 140 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 MOSP00540 346 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 MMD2Q8IY49 270 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 RAXQ9Y2V3 346 aa19.99■□□□□ 0.79
RAB40C-204ENST00000538492 IGHV1-3A0A0C4DH29 117 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 BUB1B-PAK6H3BSN5 160 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 FRMD6-AS1P0C7T7 363 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 MFAP2P55001 183 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 RPEL1Q2QD12 228 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 TIGITQ495A1 244 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 CLEC7AQ9BXN2 247 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 PPIAL4CA0A0B4J2A2 164 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 PPIAL4GP0DN37 164 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 GZMBP10144 247 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 FXYD3Q14802 87 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 JOSD1Q15040 202 aaPredicted RBP19.98■□□□□ 0.79
RAB40C-204ENST00000538492 FAM209BQ5JX69 171 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 LHFPL4Q7Z7J7 247 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 LINC00479Q96M42 142 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 RNF2Q99496 336 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 MSRB2Q9Y3D2 182 aa19.98■□□□□ 0.79
RAB40C-204ENST00000538492 TMEM256Q8N2U0 113 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 TEX45Q8NA69 505 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 THAP8Q8NA92 274 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 TNFRSF14Q92956 283 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 RPL27AP46776 148 aaKnown RBP19.97■□□□□ 0.79
RAB40C-204ENST00000538492 YPEL3P61236 119 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-204ENST00000538492 ZNF672Q499Z4 452 aaPredicted RBP19.97■□□□□ 0.79
RAB40C-204ENST00000538492 NHLRC2Q8NBF2 726 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 OR1L4Q8NGR5 311 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 PAXXQ9BUH6 204 aa19.97■□□□□ 0.79
RAB40C-204ENST00000538492 GRIFINA4D1Z8 144 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 C22orf46C9J442 243 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 MGST1P10620 155 aaKnown RBP19.96■□□□□ 0.79
RAB40C-204ENST00000538492 BPIFB3P59826 476 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 OR8I2Q8N0Y5 310 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 PRO1933Q9H354 126 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 SIGLEC9Q9Y336 463 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 ABCA1O95477 2261 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 ARHGAP32A7KAX9 2087 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 LINC00305Q7Z4B0 112 aa19.96■□□□□ 0.79
RAB40C-204ENST00000538492 SPINK4O60575 86 aa19.95■□□□□ 0.78
RAB40C-204ENST00000538492 ORM2P19652 201 aa19.95■□□□□ 0.78
RAB40C-204ENST00000538492 TMEM18Q96B42 140 aa19.95■□□□□ 0.78
RAB40C-204ENST00000538492 IGLV2-8P01709 118 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms