RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 CHODLQ9H9P2 273 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-208ENST00000538333 OR7C2O60412 319 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 CRYGCP07315 174 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 COX7A1P24310 79 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 MFAP2P55001 183 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
LIMK1-208ENST00000538333 LCN2P80188 198 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 HIST3H2BBQ8N257 126 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 LY96Q9Y6Y9 160 aa11.24□□□□□ -0.61
LIMK1-208ENST00000538333 TCRBV4S1A1TA0A5B7 111 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 K7EN84 100 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 RPL27AP46776 148 aaKnown RBP11.23□□□□□ -0.61
LIMK1-208ENST00000538333 FOXL1Q12952 345 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 KCNIP4Q6PIL6 250 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 DNAJC4Q9NNZ3 241 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 HRNRQ86YZ3 2850 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-208ENST00000538333 MDFIC2A0A1B0GVS7 189 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 GGTLC3B5MD39 225 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 LIPFP07098 398 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-208ENST00000538333 ZNF90Q03938 601 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 TNXAQ16473 311 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 RUSC1-AS1Q66K80 236 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 RPEQ96AT9 228 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 RNF2Q99496 336 aa11.23□□□□□ -0.61
LIMK1-208ENST00000538333 GAR1Q9NY12 217 aaKnown RBP11.23□□□□□ -0.61
LIMK1-208ENST00000538333 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
LIMK1-208ENST00000538333 COL6A6A6NMZ7 2263 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 OR10J4P0C629 311 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 S100A12P80511 92 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 ACTL10Q5JWF8 245 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 PATE2Q6UY27 113 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 PPP1R27Q86WC6 154 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 EAF1Q96JC9 268 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-208ENST00000538333 GPR61Q9BZJ8 451 aa11.22□□□□□ -0.61
LIMK1-208ENST00000538333 TRAV5A0A0B4J249 113 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 SELENOTP62341 195 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 HCP5Q6MZN7 132 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.61
LIMK1-208ENST00000538333 NIT2Q9NQR4 276 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
LIMK1-208ENST00000538333 TEX22C9J3V5 150 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 HNF1AP20823 631 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 CRYBB3P26998 211 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 PAX2Q02962 417 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 C19orf35Q6ZS72 473 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 TIMD4Q96H15 378 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 PFDN5Q99471 154 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 ITPR1Q14643 2758 aa11.21□□□□□ -0.62
LIMK1-208ENST00000538333 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 ETFRF1Q6IPR1 90 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 DTX2Q86UW9 622 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 OR5AU1Q8NGC0 362 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 OR10G8Q8NGN5 311 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 OR1P1Q8NH06 330 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 NEU4Q8WWR8 484 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-208ENST00000538333 RNF5Q99942 180 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 S100A2P29034 98 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 RPL15P61313 204 aaKnown RBP11.2□□□□□ -0.62
LIMK1-208ENST00000538333 LY6DQ14210 128 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 PDZD11Q5EBL8 140 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 PYY3Q5JQD4 70 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
LIMK1-208ENST00000538333 TMEM116Q8NCL8 245 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 OR11H6Q8NGC7 330 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 MISP3Q96FF7 219 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
LIMK1-208ENST00000538333 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 APELAP0DMC3 54 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 BPIFB3P59826 476 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
LIMK1-208ENST00000538333 TPTE2P1Q5T6R2 138 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 BTF3L4Q96K17 158 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
LIMK1-208ENST00000538333 HELTA6NFD8 242 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 FCN1O00602 326 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 TIMM23O14925 209 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 ARF6P62330 175 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 UBE2L3P68036 154 aaKnown RBP11.18□□□□□ -0.62
LIMK1-208ENST00000538333 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 TRGV9Q99603 122 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 TNFRSF19Q9NS68 423 aa11.18□□□□□ -0.62
LIMK1-208ENST00000538333 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms