RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 RNASEH2CQ8TDP1 164 aaKnown RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 NRGNQ92686 78 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 ZNF503Q96F45 646 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 BTF3L4Q96K17 158 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 DERL1Q9BUN8 251 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 HINT2Q9BX68 163 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 MRPL32Q9BYC8 188 aaKnown RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 TMEM167BQ9NRX6 74 aa7.46□□□□□ -1.22
DDB1-211ENST00000538280 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.22
DDB1-211ENST00000538280 E7EUB6 86 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 FOXH1O75593 365 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 IGLV1-47P01700 117 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 IGHV2-70P01814 119 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 OR10J1P30954 320 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 PDLIM4P50479 330 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 RPL15P61313 204 aaKnown RBP7.45□□□□□ -1.22
DDB1-211ENST00000538280 ERHP84090 104 aaKnown RBP7.45□□□□□ -1.22
DDB1-211ENST00000538280 FOXL1Q12952 345 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 HLA-DRB5Q30154 266 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 KCNIP4Q6PIL6 250 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 MOB3BQ86TA1 216 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 TGIF2LXQ8IUE1 241 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 THAP8Q8NA92 274 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 OR10W1Q8NGF6 305 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 OR4P4Q8NGL7 312 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 OR10X1Q8NGY0 326 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 C8orf46Q8TAG6 207 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 RNF2Q99496 336 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 COMMD5Q9GZQ3 224 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 TMEM133Q9H2Q1 129 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 NIT2Q9NQR4 276 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 TECRQ9NZ01 308 aaKnown RBP7.45□□□□□ -1.22
DDB1-211ENST00000538280 PITPNC1Q9UKF7 332 aa7.45□□□□□ -1.22
DDB1-211ENST00000538280 HRNRQ86YZ3 2850 aaPredicted RBP7.44□□□□□ -1.22
DDB1-211ENST00000538280 TRAV9-1A0A075B6T8 112 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 MDFIC2A0A1B0GVS7 189 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 PPP5D1E7EU14 171 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 SIAH2O43255 324 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 PLAUP00749 431 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 S100A2P29034 98 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 LGALS7P47929 136 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 REG1BP48304 166 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 PPOXP50336 477 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 WT1-ASQ06250 92 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 VMA21Q3ZAQ7 101 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 FAM78BQ5VT40 261 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 TEX38Q6PEX7 206 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 PQLC2Q6ZP29 291 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 TMEM183AQ8IXX5 376 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 TEX45Q8NA69 505 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 NECAP1Q8NC96 275 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 SFRP2Q96HF1 295 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 UHRF2Q96PU4 802 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 GPR61Q9BZJ8 451 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 ZNF430Q9H8G1 570 aaPredicted RBP7.44□□□□□ -1.22
DDB1-211ENST00000538280 GSN-AS1Q9NRJ2 163 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 CADP27708 2225 aa7.44□□□□□ -1.22
DDB1-211ENST00000538280 IGKV1D-37A0A075B6S9 117 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 A0A1W2PPI3 338 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 A0A1W2PPQ1 181 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 A0A1W2PRE2 83 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 FABP1P07148 127 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 CRYGCP07315 174 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 C8orf88P0DMB2 117 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 TAS2R45P59539 299 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 MLANAQ16655 118 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
DDB1-211ENST00000538280 GFI1BQ5VTD9 330 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 OR1P1Q8NH06 330 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 TMEM37Q8WXS4 190 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
DDB1-211ENST00000538280 FAM167A-AS1Q96KT0 104 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 SLC25A33Q9BSK2 321 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
DDB1-211ENST00000538280 NAV3Q8IVL0 2385 aa7.43□□□□□ -1.22
DDB1-211ENST00000538280 PRRC2AP48634 2157 aaKnown RBP7.43□□□□□ -1.22
DDB1-211ENST00000538280 IGHV2-26A0A0B4J1V2 119 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 TCRBV4S1A1TA0A5B7 111 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 IGLC7A0M8Q6 106 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 PGPEP1LA6NFU8 196 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 K7EN84 100 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 OR10J4P0C629 311 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 GATA2P23769 480 aaPredicted RBP7.42□□□□□ -1.22
DDB1-211ENST00000538280 COL8A2P25067 703 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 SUB1P53999 127 aaKnown RBP eCLIP7.42□□□□□ -1.22
DDB1-211ENST00000538280 CASP6P55212 293 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 YPEL3P61236 119 aaPredicted RBP7.42□□□□□ -1.22
DDB1-211ENST00000538280 PSG5Q15238 335 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 C10orf55Q5SWW7 151 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 OR10G8Q8NGN5 311 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 OR2T6Q8NHC8 308 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 LINC01560Q8TB33 94 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
DDB1-211ENST00000538280 TPSG1Q9NRR2 321 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms