RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 KCNAB3O43448 404 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CHST1O43916 411 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GPR137BO60478 399 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 IFNA17P01571 189 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 HOXB5P09067 269 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SEC11BP0C7V7 166 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CT45A6P0DMU7 189 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CT45A5P0DMU8 189 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CT45A7P0DMV0 189 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 PSG1P11464 419 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 RAB5AP20339 215 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GNRHRP30968 328 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 DUTP33316 252 aaKnown RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SNCAP37840 140 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 KIR2DS2P43631 304 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CAMLGP49069 296 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 PIGPP57054 158 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 ERVK-16P61578 105 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 ZNF616Q08AN1 781 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 IL15RAQ13261 267 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CLINT1Q14677 625 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GUK1Q16774 197 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 OR2B11Q5JQS5 317 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 ZNF818PQ6ZRF7 136 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SLC16A13Q7RTY0 426 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 C16orf82Q7Z2V1 217 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 PDPNQ86YL7 162 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 FAM219AQ8IW50 185 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 FOXRED2Q8IWF2 684 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SGPP2Q8IWX5 399 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 ZNF383Q8NA42 475 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 OR4S2Q8NH73 311 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 FLYWCH2Q96CP2 140 aaKnown RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 OR10C1Q96KK4 312 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 HARBI1Q96MB7 349 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 RBM14Q96PK6 669 aaKnown RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CLCC1Q96S66 551 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 NABP2Q9BQ15 211 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GINS3Q9BRX5 216 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 RTBDNQ9BSG5 229 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SLC25A33Q9BSK2 321 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 CTDSP1Q9GZU7 261 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 OR51M1Q9H341 326 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SMDT1Q9H4I9 107 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 ESM1Q9NQ30 184 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 NIT2Q9NQR4 276 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GSN-AS1Q9NRJ2 163 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 SLC2A9Q9NRM0 540 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 GAB2Q9UQC2 676 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 NSG2Q9Y328 171 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
SNHG1-208ENST00000538266 LSM5Q9Y4Y9 91 aaKnown RBP3.42□□□□□ -1.86
SNHG1-208ENST00000538266 PIGBOS1A0A0B4J2F0 54 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 C7orf77A4D0Y5 90 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 A6NDX4 124 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 C9JQL5 133 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 NBR2O15453 112 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNHG1-208ENST00000538266 FCGR3BO75015 233 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 CLN5O75503 358 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 PGLYRP1O75594 196 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-208ENST00000538266 HRASP01112 189 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 PRH1P02810 166 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 IGKV1-16P04430 117 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 SERPINE2P07093 398 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 OR8U8P0C7N1 319 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 S100A2P29034 98 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 P2RY1P47900 373 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 LGALS7P47929 136 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 SULT1A1P50225 295 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 RAB2AP61019 212 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 SRPXP78539 464 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 FABP9Q0Z7S8 132 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 VMA21Q3ZAQ7 101 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 C9orf152Q5JTZ5 239 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 DNLZQ5SXM8 178 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 GGNBP1Q5YKI7 109 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 TBC1D26Q86UD7 250 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 TCTEX1D1Q8N7M0 179 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 OR4F5Q8NH21 305 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 OR2T6Q8NHC8 308 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 RNASE11Q8TAA1 199 aaKnown RBP3.41□□□□□ -1.86
SNHG1-208ENST00000538266 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 PIFOQ8TCI5 191 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 C5orf30Q96GV9 206 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 RNF5Q99942 180 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 RASL11BQ9BPW5 248 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 SMIM3Q9BZL3 60 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 EIF5A2Q9GZV4 153 aaKnown RBP3.41□□□□□ -1.86
SNHG1-208ENST00000538266 SLC35B3Q9H1N7 401 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 NAA60Q9H7X0 242 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 KCNIP3Q9Y2W7 256 aa3.41□□□□□ -1.86
SNHG1-208ENST00000538266 MAP1AP78559 2803 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-208ENST00000538266 MTORP42345 2549 aa3.4□□□□□ -1.86
SNHG1-208ENST00000538266 CELSR1Q9NYQ6 3014 aa3.4□□□□□ -1.86
SNHG1-208ENST00000538266 A0A087WWC5 75 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 C3orf85A0A1B0GTC6 90 aa3.4□□□□□ -1.87
SNHG1-208ENST00000538266 H0Y980 276 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms