RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RPL7L1Q6DKI1 246 aaKnown RBP5.72□□□□□ -1.49
MSH6-209ENST00000538136 Q8N9W7 124 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 MBD6Q96DN6 1003 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 METTL26Q96S19 204 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 IGHV7-81A0A0B4J1V7 117 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 MPC2O95563 127 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 AWAT1Q58HT5 328 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 ZNF562Q6V9R5 426 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 C11orf42Q8N5U0 333 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 DEFB104AQ8WTQ1 72 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 FBXL17Q9UF56 701 aa5.72□□□□□ -1.49
MSH6-209ENST00000538136 DHRS11Q6UWP2 260 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 SLC16A13Q7RTY0 426 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 ZNF439Q8NDP4 499 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 OR11H6Q8NGC7 330 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 TMEM231Q9H6L2 316 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 GNG13Q9P2W3 67 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 RABL2AQ9UBK7 228 aaPredicted RBP5.71□□□□□ -1.49
MSH6-209ENST00000538136 TENM1Q9UKZ4 2725 aa5.71□□□□□ -1.49
MSH6-209ENST00000538136 MUC21A0A0G2JKD1 596 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 MUC21A0A140T8X8 626 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 VWC2LB2RUY7 222 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 HILS1P60008 231 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 HIST1H1AQ02539 215 aaPredicted RBP5.71□□□□□ -1.5
MSH6-209ENST00000538136 WT1-ASQ06250 92 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 MUC21Q5SSG8 566 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 ZNF738Q8NE65 137 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 ZFAND2BQ8WV99 257 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 TNFRSF13BO14836 293 aaPredicted RBP5.71□□□□□ -1.5
MSH6-209ENST00000538136 HTR2BP41595 481 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 DEFA6Q01524 100 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 TMEM88Q6PEY1 159 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 Q6YL49 198 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 GRAMD2BQ96HH9 432 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 BSNQ9UPA5 3926 aa5.71□□□□□ -1.5
MSH6-209ENST00000538136 E5RGE8 158 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 RAB2AP61019 212 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 RELBQ01201 579 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 TCTEX1D4Q5JR98 221 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 PSMG4Q5JS54 123 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 TMEM252Q8N6L7 170 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 OR5AN1Q8NGI8 311 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 CABLES2Q9BTV7 478 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 H2BFSP57053 126 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 UBE2L3P68036 154 aaKnown RBP5.7□□□□□ -1.5
MSH6-209ENST00000538136 LINC00482Q8N8I6 264 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 OR4F17Q8NGA8 305 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 C5orf30Q96GV9 206 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 OR4F4Q96R69 305 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 E9PQ18 207 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 OVOL1O14753 267 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 ZNF735P0CB33 412 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 UCP1P25874 307 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 SUPT4H1P63272 117 aaKnown RBP5.7□□□□□ -1.5
MSH6-209ENST00000538136 ACTL10Q5JWF8 245 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 CORO2AQ92828 525 aa5.7□□□□□ -1.5
MSH6-209ENST00000538136 PEF1Q9UBV8 284 aaKnown RBP5.7□□□□□ -1.5
MSH6-209ENST00000538136 IGHV4OR15-8A0A075B7B6 117 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 A0A087WW49 117 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TRAV14DV4A0A0A6YYC5 116 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 SPINK4O60575 86 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 CDS2O95674 445 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TSPAN15O95858 294 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 LAMTOR1Q6IAA8 161 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 APRG1Q8IVJ8 170 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 C5orf56Q8N8D9 126 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 OR11H7Q8NGC8 314 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TVP23CQ96ET8 276 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 RCC1LQ96I51 464 aaKnown RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 SLC25A39Q9BZJ4 359 aaPredicted RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 AGRNO00468 2067 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 C15orf61A6NNL5 157 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 ATP6V1G1O75348 118 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 IGKV1-39P01597 117 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 IGKV1D-39P04432 117 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 FABP1P07148 127 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 FHITP49789 147 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 EWSR1Q01844 656 aaKnown RBP eCLIP5.69□□□□□ -1.58e-9■■■■□ 26.1
MSH6-209ENST00000538136 PRR31Q5SQ13 230 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 PXDC1Q5TGL8 231 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TEPPQ6URK8 271 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 RPUSD4Q96CM3 377 aaKnown RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 RAB40CQ96S21 281 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TRAV5A0A0B4J249 113 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 A0A1B0GU03 582 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 HYPMO75409 117 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 PRIMA1Q86XR5 153 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 TEX45Q8NA69 505 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 NHLRC2Q8NBF2 726 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 LY6G5BQ8NDX9 201 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 CHRDL1Q9BU40 450 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 RHPN1-AS1Q9BWJ2 59 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 PARD6GQ9BYG4 376 aaPredicted RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 C17orf112F2Z3M2 114 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 CD74P04233 296 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 SLC25A5P05141 298 aaKnown RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 S100A4P26447 101 aaKnown RBP5.69□□□□□ -1.5
MSH6-209ENST00000538136 DEFB131AP59861 70 aa5.69□□□□□ -1.5
MSH6-209ENST00000538136 RAB4BP61018 213 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms