RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 OR8I2Q8N0Y5 310 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 ASCL2Q99929 193 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 MRPL36Q9P0J6 103 aaKnown RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 WASHC3Q9Y3C0 194 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 SCGB1D1O95968 90 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 TEX36Q5VZQ5 186 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 SRD5A3Q9H8P0 318 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 TECRQ9NZ01 308 aaKnown RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 IGHV1-8P0DP01 117 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 GNG5P63218 68 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 CR1LQ2VPA4 569 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 SLC25A33Q9BSK2 321 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 FNDC4Q9H6D8 234 aaPredicted RBP7.05□□□□□ -1.28
UBE3B-208ENST00000538070 FKBP11Q9NYL4 201 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
UBE3B-208ENST00000538070 PKD1L2Q7Z442 2459 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 IGHV3OR16-8A0A075B7F1 116 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 IGHV3-35A0A0C4DH35 117 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 CDKN1AP38936 164 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 PPOXP50336 477 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 KLF17Q5JT82 389 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TMEM144Q7Z5S9 345 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 CORO2AQ92828 525 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ANAPC16Q96DE5 110 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF355PQ9NSJ1 428 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TIMM8BQ9Y5J9 83 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TRBV24-1A0A075B6N3 115 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 PRSS46E5RG02 174 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 FCN1O00602 326 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 LYZP61626 148 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 CD69Q07108 199 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TIGITQ495A1 244 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 RUSC1-AS1Q66K80 236 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TMEM256Q8N2U0 113 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 OR1P1Q8NH06 330 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 OSR1Q8TAX0 266 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 DIRC2Q96SL1 478 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 HIST1H2BLQ99880 126 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 LSM4Q9Y4Z0 139 aaKnown RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF705FA8MVS1 300 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 NDUFS7O75251 213 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF705DP0CH99 300 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF705BP0CI00 300 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 RPL29P47914 159 aaKnown RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 MEF2CQ06413 473 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 MMDQ15546 238 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 OR5B3Q8NH48 314 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 TMEM133Q9H2Q1 129 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 SEBOXQ9HB31 216 aaPredicted RBP7.04□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF835Q9Y2P0 537 aa7.04□□□□□ -1.28
UBE3B-208ENST00000538070 A0A1B0GWJ7 208 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 A0A1W2PPI3 338 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 NCBP2LA6PVI3 153 aaKnown RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 USF1P22415 310 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 RPL27AP46776 148 aaKnown RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 SUB1P53999 127 aaKnown RBP eCLIP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 TAS2R45P59539 299 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 SSX2Q16385 188 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 DMRTC2Q8IXT2 367 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 DNAJC4Q9NNZ3 241 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 PITPNC1Q9UKF7 332 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 K7EN84 100 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 IGHV3-23P01764 117 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF672Q499Z4 452 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 ZNF833PQ6ZTB9 187 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 TMEM186Q96B77 213 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 OR51M1Q9H341 326 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 NOTCH2Q04721 2471 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 IGHV2-26A0A0B4J1V2 119 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 SNURFLB1AK76 121 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 B9A039 149 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 C8orf88P0DMB2 117 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 USF2Q15853 346 aaPredicted RBP7.03□□□□□ -1.28
UBE3B-208ENST00000538070 TEX38Q6PEX7 206 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 LINC00305Q7Z4B0 112 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 OR1L6Q8NGR2 347 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 VKORC1Q9BQB6 163 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 BET1LQ9NYM9 111 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 DOPEY2Q9Y3R5 2298 aa7.03□□□□□ -1.28
UBE3B-208ENST00000538070 SLC25A5P05141 298 aaKnown RBP7.02□□□□□ -1.29
UBE3B-208ENST00000538070 TMPRSS3P57727 454 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 PAX5Q02548 391 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 VSTM2AQ8TAG5 236 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 NDUFA4L2Q9NRX3 87 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 NAT8BQ9UHF3 227 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 GGTLC3B5MD39 225 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 AMBPP02760 352 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 CAMPP49913 170 aa7.02□□□□□ -1.29
UBE3B-208ENST00000538070 CNN1P51911 297 aaKnown RBP7.02□□□□□ -1.29
UBE3B-208ENST00000538070 PRRX1P54821 245 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms