RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 C9orf135Q5VTT2 229 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 OR2H1Q9GZK4 316 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 THYN1Q9P016 225 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 RELNP78509 3460 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 TRAV26-1A0A087WT03 109 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 OR5AL1P0C617 328 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 UQCRFS1P47985 274 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 CRYBA4P53673 196 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 RPL30P62888 115 aaKnown RBP9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 PLGLB1Q02325 96 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 H1FXQ92522 213 aaKnown RBP9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 FAM168AQ92567 244 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 MBD6Q96DN6 1003 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 C1QTNF5Q9BXJ0 243 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 KCNIP1Q9NZI2 227 aa9.33□□□□□ -0.92
SEMA4D-221ENST00000537934 TNRC6AQ8NDV7 1962 aaKnown RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 SYNGR1O43759 233 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 FOXE3Q13461 319 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 EIF4EBP1Q13541 118 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 TMEM167BQ9NRX6 74 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 KLF13Q9Y2Y9 288 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 A0A1W2PPM0 123 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 CXCL13O43927 109 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 CATR1Q13166 79 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 ZNF766Q5HY98 468 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 PERPQ96FX8 193 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 B4GALT7Q9UBV7 327 aa9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 LSM4Q9Y4Z0 139 aaKnown RBP9.32□□□□□ -0.92
SEMA4D-221ENST00000537934 GAGE12HA6NDE8 117 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 PRSS46E5RG02 174 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 B4GALT1P15291 398 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 BRWD1-AS2P59051 145 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 SRYQ05066 204 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 KIR3DS1Q14943 382 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 TPRX1Q8N7U7 411 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 STXBP6Q8NFX7 210 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 OR10D3Q8NH80 312 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 SSMEM1Q8WWF3 244 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 GRAMD2BQ96HH9 432 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 PRDM14Q9GZV8 571 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 C17orf98A8MV24 154 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 KLRC4-KLRK1H3BQV0 150 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 SVILO95425 2214 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 LIPFP07098 398 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 PCBD1P61457 104 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 MEF2CQ06413 473 aaPredicted RBP9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 ATP5L2Q7Z4Y8 100 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 FAM222BQ8WU58 562 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 FAM216AQ8WUB2 273 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 NCOR2Q9Y618 2525 aa9.31□□□□□ -0.92
SEMA4D-221ENST00000537934 AGFG2O95081 481 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 RAC3P60763 192 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 PSG5Q15238 335 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 FAM214BQ7L5A3 538 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 STPG3Q8N7X2 389 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 WDR31Q8NA23 367 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 FGFBP3Q8TAT2 258 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 UBALD1Q8TB05 177 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 C1orf159Q96HA4 380 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 ZNF488Q96MN9 340 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 CA6P23280 308 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 FABP6P51161 128 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 C3AR1Q16581 482 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 CCDC144NLQ6NUI1 221 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 COLCA1Q6ZS62 124 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 FA2HQ7L5A8 372 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 SSX8Q7RTT4 187 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 NHLRC2Q8NBF2 726 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 LRRC29Q8WV35 223 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 C5orf30Q96GV9 206 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 NAA38Q9BRA0 125 aaKnown RBP9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 DEFB127Q9H1M4 99 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 BSNQ9UPA5 3926 aa9.3□□□□□ -0.92
SEMA4D-221ENST00000537934 SNAI2O43623 268 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 TAAR6Q96RI8 345 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 IDI2-AS1Q9NZ38 188 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 TSSC4Q9Y5U2 329 aaPredicted RBP9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 A0A1B0GXF2 115 aa9.29□□□□□ -0.92
SEMA4D-221ENST00000537934 FGF6P10767 208 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms