RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ADCYAP1P18509 176 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SRD5A2P31213 254 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 FGF12P61328 243 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 ABHD12Q8N2K0 398 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SPANXA1Q9NS26 97 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SYS1-DBNDD2H3BUS1 97 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 IGKV1D-16P01601 117 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 C3orf79P0CE67 100 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 ID1P41134 155 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 OSTCQ9NRP0 149 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 COL5A3P25940 1745 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TRACP01848 142 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 CD55P08174 381 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 VEGFBP49765 207 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 INO80CQ6PI98 192 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 PRSS47A8MTI9 375 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SAA1P0DJI8 122 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 PTCRAQ6ISU1 281 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 STPG4Q8N801 248 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TIMP3P35625 211 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 MFAP4P55083 255 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 K7EP34 96 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 HOXC4P09017 264 aaPredicted RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 UCP1P25874 307 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 NGFRP08138 427 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 PLNP26678 52 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 CEACAM21Q3KPI0 293 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM242Q9NWH2 141 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 IGLV1-36A0A0B4J1U3 117 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 GZMHP20718 246 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 ZP4Q12836 540 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 LINC00305Q7Z4B0 112 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 GPX1P07203 203 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 HIST1H4AP62805 103 aaKnown RBP4.8□□□□□ -1.64
CSMD1-215ENST00000537824 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 SPEM1Q8N4L4 309 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 FSCN3Q9NQT6 498 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 FBXL7Q9UJT9 491 aa4.8□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM229AB2RXF0 380 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 K7EP13 123 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 BHLHA9Q7RTU4 235 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 IGHV5-51A0A0C4DH38 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 IGKCP01834 107 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 MESP1Q9BRJ9 268 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 LHX2P50458 406 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 BMPERQ8N8U9 685 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 NEUROG3Q9Y4Z2 214 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE7O76087 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE12FP0CL80 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE12GP0CL81 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE12IP0CL82 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 CEACAM8P31997 349 aaPredicted RBP4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE4Q13068 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 DRAM1Q8N682 238 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 IGHV3-49A0A0A0MS15 119 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 CD160O95971 181 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 MST1P26927 711 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 SARAFQ96BY9 339 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 RAB1BQ9H0U4 201 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 R3HDMLQ9H3Y0 253 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 NRXN2Q9P2S2 1712 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF703Q9H7S9 590 aaPredicted RBP4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE12HA6NDE8 117 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 TMEM14DPA8MWL7 114 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 C9orf50Q5SZB4 431 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 Q6ZWC4 215 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 WBP1LQ9NX94 342 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 DTX4Q9Y2E6 619 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 ZXDCQ2QGD7 858 aaPredicted RBP4.79□□□□□ -1.64
CSMD1-215ENST00000537824 KLF17Q5JT82 389 aaPredicted RBP4.79□□□□□ -1.64
CSMD1-215ENST00000537824 CDPF1Q6NVV7 123 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 DYNLRB2Q8TF09 96 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 FMC1Q96HJ9 113 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 A0A1W2PQF6 199 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 C9JQL5 133 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 IL11P20809 199 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 GPBAR1Q8TDU6 330 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 A0A087WV48 116 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 M0R2P5 195 aa4.79□□□□□ -1.64
CSMD1-215ENST00000537824 COL11A2P13942 1736 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CCL25O15444 150 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CNTFRP26992 372 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CEACAM3P40198 252 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF146Q15072 292 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 C17orf99Q6UX52 265 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 ATP5L2Q7Z4Y8 100 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CIARTQ8N365 385 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 RAB1CQ92928 201 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 LOXL2Q9Y4K0 774 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 GDF15Q99988 308 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 C1RLQ9NZP8 487 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 A0A0J9YW62 118 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms